Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00065 ATGAAGGGTTATGAACCCCGTTCAAGCTCTTCTTGTGCAGCCTGCAAGTTCTTGAAAAGAAGATGCATACCCAATTGTATATTTGCACCTTATTTTCGCTCCGATGAGTGCAAGAAATTCGCCAAGGTTCACAAAGTATTTGGAGCCAGCAATGTGAGCAAGATCCTCATTGAAGTGCCAGAGGAGCAGAGGGAAGACACGGTGAATTCACTGGCGTATGAAGCAGAAGCAAGACTTAAGGACCCAGTTTATGGATGCATTGGTGCCATAGCTCTGTTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGATCGTCTTGCTCGTTATGCTGCTGCTGCTGCTGCTGCTGCTACTCCTTCCACTGATATCTTCAATTCCCATGTTAGCTTACCACCCTTCCCTGAATTTTTCACTTGCAGTGATTTCAATGACAACTTATGCCACAGTTCATCATCTCAATCATTGAGCCGACATGAAACGGTGGATGATTTCATCCAAAGCCCATATATATTTTGA 531 0.4463 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLKDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAAAAAATPSTDIFNSHVSLPPFPEFFTCSDFNDNLCHSSSSQSLSRHETVDDFIQSPYIF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00065 176 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Gabi817g00065 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 145 - -
Gabi817g00065 176 Coils Coil 90 117 - -
Gabi817g00065 176 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00065 Gabi-Chr817 609139 609931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00065 1 127 AS2 family AT3G11090 72.441 1.23e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi817g00065 LOB 7.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00065 - - gmx:100305534 270.781