Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00040 ATGGCTGTGTCCAACGGCGTCGAAGCTGTGCTAGAGTTTCTCAGGAATAATGGGTTATCGGAAGCCGAGTCTGCTCTCAGAGAAGACATCATCGAGAAGAGTGATCTGGGGTCCTTTGACTACGAGAAATTCTTCTTCCCCATGGTTCCGCCGCCGCCTCCGGTCAGGGTCCGATCCTTTTCGCGGCCGTCGGAGTCGCCGGGCTTCGCCGGAGACTGCTCCAAATCGACCTCTGTTTCGTCGGAGGATGAGTTTGTGAGCATCGGGTCGTCCACTTCTCGTGTTTCTTCTTCAGAATTCATCAATCCGTATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCCGAATCTTCTTCTGATAGATTATCTCAATTCGGCACAGCACGAGATTATCACGAATTTGATATGCAAAATGAACCATATTGGTATAATGAAAAAGATGATGACAATTTCTTGACTCCTAGTTTTGAAGGGACGGATTTCGTTGGGTGTGAAAGTGAAGATAAGTTTGTCATGACAGCAGAAACTGAAAATCAACATGACAGTTCTCTGGGTTTTAATTTCAACCATGAAGAATTTCAATCAGAGGGAAATGGTGCTTACAAGGACAAGGCATGCCTTTATAATCATTCCTCTCTAGGGGATGGAAATGTGACTCACTCACAAGGCTATTGTCATGTGGATAATAAAGACCAGGTTGAAGGGCAATTAGAGGGCAAGGATGAGAAACACACCATTCCCTATAGTTGTGAAGTTCCATTTTGCAAAAGCTGTGGAGGTTCAGGAGATTCTTGTAGTGGGGATCCTACAAACTTCAGCTACCCTAATTTGAAGGAAATCCATCTGAATGATTTTCATTTGAAGGTTGTTGGGGATATTACCCCATTTGATTCTGCCCCAGAACATACTTTGAATCGAAGTTTTGACTACCACACTAAAAATGACAGCAGTAAGGGGGACAGGGGTCCTTATGACTTAACTAACAAAGTTGCTGAAACAGATCTACCAAATGGATTTGACACCTACAAGGCAGGAGATGGAAGAGAATCCGGTGAAGAGTGCCAAGATCCAGATGTTATTGCAGATGGAGAGGATACTACTGATGATGAACTCTTAAAGTACATTCAAGAGGATGAATATGAAGTCTTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGAACTTCCCATTGTGCTAAATACAGTCATGGCTGGCAGGTACTATGTAACAGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGATGGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGACCCAACAGATGGACGCCACATATTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCTAGAATCTGGAGGGGAAGCATATTTTACATTGAACAGGTTGCAGCTCATTACTCGTCAGTGTTTGGAGGCATTGCAATACTTGCATAACTTGGGAATTGTTCACTGCGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGATGTGAAATAAAGATTATTGATCTCGGAAGCAGTTGCTTTCAAACAGACAATTTGTGCCTATATGTACAATCCCGATCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTTGGTTGCATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATGCAGTTGTGATGATTCTCGCCCGCATGATTGGAATGATTGGTCCTATTGATCTGGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTCACCAAAGAGAGACTAATCAAATGGAGTACATAA 1992 0.4177 MAVSNGVEAVLEFLRNNGLSEAESALREDIIEKSDLGSFDYEKFFFPMVPPPPPVRVRSFSRPSESPGFAGDCSKSTSVSSEDEFVSIGSSTSRVSSSEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHEFDMQNEPYWYNEKDDDNFLTPSFEGTDFVGCESEDKFVMTAETENQHDSSLGFNFNHEEFQSEGNGAYKDKACLYNHSSLGDGNVTHSQGYCHVDNKDQVEGQLEGKDEKHTIPYSCEVPFCKSCGGSGDSCSGDPTNFSYPNLKEIHLNDFHLKVVGDITPFDSAPEHTLNRSFDYHTKNDSSKGDRGPYDLTNKVAETDLPNGFDTYKAGDGRESGEECQDPDVIADGEDTTDDELLKYIQEDEYEVFDLRIIHRKNRTGFEESKELPIVLNTVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPTDGRHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNLESGGEAYFTLNRLQLITRQCLEALQYLHNLGIVHCDLKPENILIKSYKRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMIGPIDLEMLVKGQETHKYFTKERLIKWST 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00040 663 ProSiteProfiles Protein kinase domain profile. 415 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00040 663 CDD PKc_DYRK_like 415 662 - -
Gabi817g00040 663 FunFam Putative serine/threonine-protein kinase dyrk2 409 496 - -
Gabi817g00040 663 MobiDBLite consensus disorder prediction 338 359 - -
Gabi817g00040 663 SMART serkin_6 415 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00040 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Gabi817g00040 663 PANTHER DUAL SPECIFICITY PROTEIN KINASE 112 654 - -
Gabi817g00040 663 Gene3D Phosphorylase Kinase; domain 1 410 496 - -
Gabi817g00040 663 MobiDBLite consensus disorder prediction 104 124 - -
Gabi817g00040 663 Pfam Protein kinase domain 417 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00040 663 SUPERFAMILY Protein kinase-like (PK-like) 405 659 IPR011009 -
Gabi817g00040 663 MobiDBLite consensus disorder prediction 57 77 - -
Gabi817g00040 663 Gene3D Transferase(Phosphotransferase) domain 1 469 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00040 Gabi-Chr817 353799 358398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00040 413 657 MAP Kinase Gene Family AT5G19010 33.585 1.36e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gabi817g00040 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00040 - - gmx:100783988 1055.82