Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00039 ATGGCTGTGTCCAACGGCGTCGAAGCTGTGCTAGAGTTTCTCAGGAATAATGGGTTATCGGAAGCCGAGTCTGCTCTCAGAGAAGACATCATCGAGAAGAGTGATCTGGGGTCCTTTGACTACGAGAAATTCTTCTTCCCCATGGTTCCGCCGCCGCCTCCGGTCAGGGTCCGATCCTTTTCGCGGCCGTCGGAGTCGCCGGGCTTCGCCGGAGACTGCTCCAAATCGACCTCTGTTTCGTCGGAGGATGAGTTTGTGAGCATCGGGTCGTCCACTTCTCGTGTTTCTTCTTCAGAATTCATCAATCCGTATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCCGAATCTTCTTCTGATAGATTATCTCAATTCGGCACAGCACGAGATTATCACGAATTTGATATGCAAAATGAACCATATTGGTATAATGAAAAAGATGATGACAATTTCTTGACTCCTAGTTTTGAAGGGACGGATTTCGTTGGGTGTGAAAGTGAAGATAAGTTTGTCATGACAGCAGAAACTGAAAATCAACATGACAGTTCTCTGGGTTTTAATTTCAACCATGAAGAATTTCAATCAGAGGGAAATGGTGCTTACAAGGACAAGGCATGCCTTTATAATCATTCCTCTCTAGGGGATGGAAATGTGACTCACTCACAAGGCTATTGTCATGTGGATAATAAAGACCAGGTTGAAGGGCAATTAGAGGGCAAGGATGAGAAACACACCATTCCCTATAGTTGTGAAGTTCCATTTTGCAAAAGCTGTGGAGGTTCAGGAGATTCTTGTAGTGGGGATCCTACAAACTTCAGCTACCCTAATTTGAAGGAAATCCATCTGAATGATTTTCATTTGAAGGTTGTTGGGGATATTACCCCATTTGATTCTGCCCCAGAACATACTTTGAATCGAAGTTTTGACTACCACACTAAAAATGACAGCAGTAAGGGGGACAGGGGTCCTTATGACTTAACTAACAAAGTTGCTGAAACAGATCTACCAAATGGATTTGACACCTACAAGGCAGGAGATGGAAGAGAATCCGGTGAAGAGTGCCAAGATCCAGATGTTATTGCAGATGGAGAGGATACTACTGATGATGAACTCTTAAAGTACATTCAAGAGGATGAATATGAAGTCTTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGAACTTCCCATTGTGCTAAATACAGTCATGGCTGGCAGGTACTATGTAACAGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGATGGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGACCCAACAGATGGACGCCACATATTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCTAGAATCTGGAGGGGAAGCATATTTTACATTGAACAGGTTGCAGCTCATTACTCGTCAGTGTTTGGAGGCATTGCAATACTTGCATAACTTGGGAATTGTTCACTGCGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGATGTGAAATAAAGATTATTGATCTCGGAAGCAGTTGCTTTCAAACAGACAATTTGTGCCTATATGTACAATCCCGATCTTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTTGGTTGCATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATGCAGTTGTGATGATTCTCGCCCGCATGATTGGAATGATTGGTCCTATTGATCTGGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTCACCAAAGAGTATGATATTTATTATTTAAACGAGGAGACTAATCAAATGGAGTACATAATTCCAGAGGAGTCATCATTGGAGCAGCACCTACAGGTTACTGATACTATGTTTATCGACTTTGTCAGATACTTGCTTAGCATAAACCCCAAAAGAAGGCCTACAGCAAGACAGGCGCTAAAGCATCCATGGCTTTCTTATGTTTACAAGTCATAG 2172 0.4157 MAVSNGVEAVLEFLRNNGLSEAESALREDIIEKSDLGSFDYEKFFFPMVPPPPPVRVRSFSRPSESPGFAGDCSKSTSVSSEDEFVSIGSSTSRVSSSEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHEFDMQNEPYWYNEKDDDNFLTPSFEGTDFVGCESEDKFVMTAETENQHDSSLGFNFNHEEFQSEGNGAYKDKACLYNHSSLGDGNVTHSQGYCHVDNKDQVEGQLEGKDEKHTIPYSCEVPFCKSCGGSGDSCSGDPTNFSYPNLKEIHLNDFHLKVVGDITPFDSAPEHTLNRSFDYHTKNDSSKGDRGPYDLTNKVAETDLPNGFDTYKAGDGRESGEECQDPDVIADGEDTTDDELLKYIQEDEYEVFDLRIIHRKNRTGFEESKELPIVLNTVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPTDGRHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNLESGGEAYFTLNRLQLITRQCLEALQYLHNLGIVHCDLKPENILIKSYKRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMIGPIDLEMLVKGQETHKYFTKEYDIYYLNEETNQMEYIIPEESSLEQHLQVTDTMFIDFVRYLLSINPKRRPTARQALKHPWLSYVYKS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00039 723 Gene3D Transferase(Phosphotransferase) domain 1 469 717 - -
Gabi817g00039 723 FunFam Putative serine/threonine-protein kinase dyrk2 409 496 - -
Gabi817g00039 723 FunFam Serine/threonine-protein kinase ppk15 494 718 - -
Gabi817g00039 723 CDD PKc_DYRK_like 415 717 - -
Gabi817g00039 723 PANTHER DUAL SPECIFICITY PROTEIN KINASE 112 717 - -
Gabi817g00039 723 MobiDBLite consensus disorder prediction 338 359 - -
Gabi817g00039 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Gabi817g00039 723 SMART serkin_6 415 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00039 723 ProSiteProfiles Protein kinase domain profile. 415 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00039 723 MobiDBLite consensus disorder prediction 104 124 - -
Gabi817g00039 723 Pfam Protein kinase domain 417 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00039 723 MobiDBLite consensus disorder prediction 58 77 - -
Gabi817g00039 723 Gene3D Phosphorylase Kinase; domain 1 410 496 - -
Gabi817g00039 723 SUPERFAMILY Protein kinase-like (PK-like) 405 719 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00039 Gabi-Chr817 353454 358398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00039 412 712 MAP Kinase Gene Family AT5G19010 31.776 1.31e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gabi817g00039 Pkinase 2.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00039 - - gmx:100783988 1182.16