Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi817g00037 ATGAAGAAAAAACCACGCTCCTCCGCCGTCACCTTCATTCTCTCCGCCGCGGTGTTTATCCTATGTTCAGTACCATCATTTCATGCTCTCGGCTCCGGCACCTCCCTCGCCATCAATGACGCCTCCGCCACCGTCTGCGGCATCGTGGCAGAGGAATCGACTCGGCGCATTGAGTGCTACCGTCGCGGCCAGGTCATCTCCGCCACACCGAACGTGTCTTTCTCGTCGATCTCTGGCGGGAGGAGCTACTTCTGCGGCCTCAGGTCCGGCAACTACAGTTTGCTCTGTTGGGACACCGTCTCTTCCGAAGTTGGCTTCGAAAGGAAAAGGCTTTACAACAATGACACTGTTCTATTCGAGAATCTCTCTGTCGGGGATACCCAAGTTTGTGCCACGGTCGTCGGCGCCGGAACGGTGTCGTGTTGGAGAGTCAATGGCGCGTTTGAATTGCCTTCTGGGTCTGATCATTTTGCGTCTATTTCATCTGGGTCTGGCTTCTCTTGCGGAATTCTGAGGAACAGTTCAAGGGTTCGGTGTTGGGGAATTGAGTCCGTTGCAAGAAGGATAGAGAATGCGTTTGGAAACAATTCTATGGTGAGTCTTGTAGCTGGTGATTCACATGTTTGTGGATTAAATTCAACTGGGTTTTTGGTTTGCAGAGGAAGTAATAGTTCTGGGCAAATCGATGTTCCGCAAGGAGGGGCTTTGGAGTATTCTGGGTTAGCACTCGGAGCTGAGCATAGCTGTGCTATTAGAAGATCCAATGGTTCTGTCGTTTGCTGGGGTGGCAGAGGATTGTTCTCGGTTAATGTTACAGAAGGTGTTTCTTTTGAGATCATTGTTTCTGGGTCGAATTTTACTTGCGGATTGACAACAAACAATTTTTCAGTTATGTGTTGGGGACCTGGTTGGTCTAATAGTTCTCATTCTGGTTCAGGTTTTGAGCTTCCCTTGCCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGCAGTGAGTGTGGCATATATCCTCAATCTCAAACTTTGTGTTCTGGCTATGACAACATTTGCAAGCCACAGCCTTGTTGGCCTCAAATGTCACCGCCAGCACCGCTGCTGATACCACCATCGGTGCCGGCACCACCACCATCTTCTCGATCAAAGACTTTGACAAGGGGCTTATTGGCATTTGTCATTGTTGGATCCATGGGAGGTGTTGCTGGTATTTGCACAGTAGTTTATTGCTTGTGGACTGGGGTTTGTTTTGGGAAGAAGAAAATCCACAATTCTGTGCAACCAACAATCACTAGAGGTGGCAGTGTCAATGGTGGGTCTGTTTCAAATAATAGCCCACCTTCGAGATCATCCACCATTAGGCGTCAGGGTTCAAGGATAATGAGGCGGCAAAGAAGTGGAACCTCATCAACAAAACATCCGGATATGGCAGAGGAGTTCACCCTTGCTGAGCTCGTGGCAGCAACCAACAATTTCTCACTTGAGAACAAGATTGGTGCTGGAAGCTATGGTGTTGTGTACAGAGGCAAACTTGCTGATGGTCGTGAGGTTGCAATCAAAAGGGAGGAAGCTGGTACTACTAAGGTGAAGATGTTTCTAGAGAAAGAGAGTGCATTTGAGTCAGAATTGGCCTTCTTGTCACGTCTACATCACAAACACTTGGTTAGGCTAGTTGGGTTCTGCGAAGAGAAAGATGAAAGACTCTTGGTGTATGAGTACATGAAGAATGGGGCCTTACATGATCATTTGCATGACAAAAACAACGTGGAGAAGAGTAGTAGTGTATTGAATTCTTGGAAAATGAGGATCAAAATTGCACTGGATGCTTCGCGAGGAATTGAATATCTCCATAATTATGCAGTTCCATCCATAATTCACAGAGATATAAAGTCTTCTAACATTCTCATTGACTCGACTTGGACGGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCAGACTCTGACCATGATTACCGAACATTGAAGGCAGCTGGAACAGTTGGATACATTGATCCTGAATATTATGGTCTAAATGTTGTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTATTGCTTGAACTCTTAACGGGAAAGAGAGCTATATTCAAGGATGGTGAAAATGGAGGCACCCCTATGAGCGTGGTAGACTTTGCAGTGCCTGCATTTATGGCTGGAGAGTTGGAGAAAATTTTGGACCCGAGGGTTGAACCACCAGTGTTGAATGAAACAGAAGCGGTGGAGCTTGTGGCCTACACTGCCATGCATTGTGTAAATATTGAAGGGAAGAACAGACCAATAATTTCTGACATCGTGGCCAATTTGGACCGTGCTTTGGCTCTTTGTGAGAGTAGTCATGCTCATGGCACTATTTCCAGCAGTTCAATCTCTATTGCATCTGACTGA 2412 0.4664 MKKKPRSSAVTFILSAAVFILCSVPSFHALGSGTSLAINDASATVCGIVAEESTRRIECYRRGQVISATPNVSFSSISGGRSYFCGLRSGNYSLLCWDTVSSEVGFERKRLYNNDTVLFENLSVGDTQVCATVVGAGTVSCWRVNGAFELPSGSDHFASISSGSGFSCGILRNSSRVRCWGIESVARRIENAFGNNSMVSLVAGDSHVCGLNSTGFLVCRGSNSSGQIDVPQGGALEYSGLALGAEHSCAIRRSNGSVVCWGGRGLFSVNVTEGVSFEIIVSGSNFTCGLTTNNFSVMCWGPGWSNSSHSGSGFELPLPPILPGPCVQSSCSECGIYPQSQTLCSGYDNICKPQPCWPQMSPPAPLLIPPSVPAPPPSSRSKTLTRGLLAFVIVGSMGGVAGICTVVYCLWTGVCFGKKKIHNSVQPTITRGGSVNGGSVSNNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDMAEEFTLAELVAATNNFSLENKIGAGSYGVVYRGKLADGREVAIKREEAGTTKVKMFLEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALHDHLHDKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDSTWTARVSDFGLSLMSPDSDHDYRTLKAAGTVGYIDPEYYGLNVVTAKSDVYGLGVVLLELLTGKRAIFKDGENGGTPMSVVDFAVPAFMAGELEKILDPRVEPPVLNETEAVELVAYTAMHCVNIEGKNRPIISDIVANLDRALALCESSHAHGTISSSSISIASD 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi817g00037 803 Gene3D Phosphorylase Kinase; domain 1 452 572 - -
Gabi817g00037 803 SUPERFAMILY Protein kinase-like (PK-like) 468 777 IPR011009 -
Gabi817g00037 803 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 195 788 IPR044815 GO:0004674
Gabi817g00037 803 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Gabi817g00037 803 FunFam Serine/threonine-protein kinase-like protein CCR4 573 797 - -
Gabi817g00037 803 ProSiteProfiles Protein kinase domain profile. 491 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00037 803 SUPERFAMILY RCC1/BLIP-II 65 301 IPR009091 -
Gabi817g00037 803 MobiDBLite consensus disorder prediction 427 454 - -
Gabi817g00037 803 Gene3D - 188 317 IPR009091 -
Gabi817g00037 803 SMART serkin_6 491 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi817g00037 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Gabi817g00037 803 Gene3D - 24 187 IPR009091 -
Gabi817g00037 803 Gene3D Transferase(Phosphotransferase) domain 1 573 794 - -
Gabi817g00037 803 MobiDBLite consensus disorder prediction 427 473 - -
Gabi817g00037 803 FunFam serine/threonine-protein kinase-like protein CCR1 460 572 - -
Gabi817g00037 803 Pfam Protein kinase domain 492 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi817g00037 Gabi-Chr817 314423 316834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi817g00037 3 803 Receptor kinase-like Gene Family AT3G55950 59.492 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gabi817g00037 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi817g00037 - - gmx:100782916 1217.6