Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi813g00001 ATGGAACAATCAAGATTCCAAAACACATTCCTATTCAATAGCATGGAACCTAGAGATGAAGAACATCAGCCAGGATCACAATCAGTAATGCAGGACCATCTGGTTAACATGCATTCTAGTAGAAGAGGGCCTGATCTCAATACATCAGAAGTTAAACCTGTACTTAATTACTCGATACAGACGGGTGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATCTCAGGAAGCCTGTAAGTGATTCCAATTATACAACAGGTTATATGGAGCTGAAAGGCATTTTAGGCATCAGTCATGCAGGGTCTGAAACAGGATCAGATATTTCTATGCTCTCAATGGTTGAAAAATATCCAAAAGAGTTCGATAGAATGAACACATCTACACATGGAGACAGAAGCAATTATGGGTCAATTCGATCGATATCAAAAGCTTCACTGAATCAGGACAATAGGCAATTTGTGCATGGCTATGGTTCTTCTGGAGGTTATGATACCTCATCAATGATGATGAAATTTCTTTGCAGCTTTGGTGGTAGAATATTGCCACGACCCTCTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGCATTCTTCGTATAAGAAAGGACATATCTTGGCAGGAACTTATGCAGAAAGCATTGCTAATCTATAATCAGGTTCATGTAATCAAGTATCAGCTTCCAGGGGAAGAACTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATTTAATCATGTAGAAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAGTTTGGTCTCAGCACCGGAGGTGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAAAAACTCAACCCTAATTGGTGTCAGCTTTTCAGCAAATGATATGAATGAATTGGACAGGCAAAATATTGACAGAGAGAATTATAGAGTTTCTGTAGAATCTGTAGGTGCTGGCAATGCTCCCCTGACTAACAATTTTGACTCATCATTGGTTAATCAGTCTTCACAACCAGTGCTACCAACTTCCTCAAATTGTTATGAAACCTATCCAATGTTTTATGGTGATCAAATGATGGGCCATGGCGAACCTAGTGGTCAATATTTTATTAATCATGGCCTTAATCCTTCTCATAAACCTGTTATTGGAGAGACTCCTATTACTATGCCTCCTCATATGCTGATTAATCAACAAGAGGTTTTCAATGAAGGCCTTCCACCTATTGGATTACAAGTACAAAATTCAGAAATATCAGCAACATTGGCGAAAAAGATGGGTGATAGTTCATTTCAACAAGGAAGTGACCCTGGGGATGTTTTATCCTTGGAAAGACCATCTCCAGCTCCTGCACAACTGTTTAATGGTTACTTGAGAAATAATTTCCCTGAAGCATCAGTTATGGTTACTATGCCAGAGGGGCATTCATTACCTCCAACAAAAATGGACCAGATCCAAGATTATGAAGAGGCTTCTTCTACATCTAGCAGTGCATTTGGTCCTGCTTATGTTGATTCCCACCCCAATGGTGTTGACTTGAGTTCTCTTCACCCGCCTCCTCTTCCTAGAAGAGTTTACTATTCAGAAAGAATTCCCAGGGAGCAAGTGGAGTTGCTGAATCGGTCCTCAAAGTCGGATGATGCACACAGTTCTCAGTTTCATGTTTCAGATTTGCTTTCTGATGTCAACCCGCCGGATTCAGTTACAGAAACTGGTGATAACTTGCATGATGCAAACAATCAGATGAATTCAGAGCTAACTGAGAATGTGAATCCTGAGTTGAAGCAGGTATTACCAGACAATGAAGGAAGTAAAGATGTGTTACATAAGGATAATGTTGTTAGGTTGGAAACAGAAATTTATTATAAAGATAACCATAATAAACCCCTGCTTGATGAGACAAAAGACAGCAAATCACACTTTCCTACTTTGCACCAGGTTTCTTCTGTTAAGCACCATGATGATCCAGCATCCAATCTTCCAGATATTGATTGGGGTGATACCTCTGTGAAAGAACCTAATGAAGATTTTAATGTGCAAACACTACCTGTTTCTTCAAATGGGAACACAACTACAAAAGATGATTCTCAAGATTTTCATTCCAATGTTGTTTCCAAACAAGCACAAGGTGACATTCTTATTGATATTAATGATCGATTCCCGCGTCAATTGCTTAGTGACATGTTCTCTAAAGCAATACTTGAAGAATATCCCTCTGGTATACATCCATTAACCTCAGATGGGGTGGGGCTAAGCATAAACATGGAAAATCATGAACCTAAACCATGGTCTTATTTTCAAAAATTGGCTCAAGAAGGGATCGATAATGTGTCTCTTATTGACCAGGATCATCTTGGTTTTTTACCTGCGGTAGGAACAATGGTAGGAGATAATGGAACTCAACATGTTGCACCTTTAACAACTGATGAAGTTTCTCTAAACCATGCAGAGTCCCACCTCAATTTTGGTGAAGAAAATCAGGAAGACATACATGGAAAGATTGGAAAAGAAACCTCTGTTCTTAAGTCAAATTATGATCATTCCCAAGTGAACGATACTGAAAGTATGCAATTTGATGCTATGTTGGAAAACCTAAGAGCACAAGAGTCAGAATCTGAGGTTGGGAAGTTTGAAACCAGAAACAGTGATCTACCTCCTCTTGATCCTTCTTTAGGAGAATTTGATATGAGTACCTTGCAGGTCATTATGAATGAAGATCTTGAAGAGCTGAGGGAACTTGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTCGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTGCAAGATGGACCGGGAGGAACGATGGCCACTGTTGCAGAGTACATGGTGGATGGTTCTCTTAGACATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTCGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGATCCTTTAAGGCCGATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATCAAACGAAATACCTTGGTTTCTGGTGGTGTGCGGGGGACTTTACCTTGGATGGCACCAGAGCTGCTTAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTTAATAACACATTAAGGCCAACAATACCAAATTATTGTGATCATGAATGGAGAACACTGATGGAGCAATGTTGGGCACCCAATCCTGCAGCTAGGCCATCCTTCACTGAAATAGCTAGTCGACTGCGTGTTATGTCTGCAGCTGCTAGAGAAACCAAAACACACAAGGCATCTAAATGA 3633 0.4016 MEQSRFQNTFLFNSMEPRDEEHQPGSQSVMQDHLVNMHSSRRGPDLNTSEVKPVLNYSIQTGEEFALEFMRDRVNLRKPVSDSNYTTGYMELKGILGISHAGSETGSDISMLSMVEKYPKEFDRMNTSTHGDRSNYGSIRSISKASLNQDNRQFVHGYGSSGGYDTSSMMMKFLCSFGGRILPRPSDGKLRYVGGQTRILRIRKDISWQELMQKALLIYNQVHVIKYQLPGEELDALVSVSSDEDLQNMMEEFNHVEDREGSQKLRMFLFSMSDLEDAQFGLSTGGDDSEIQYVVAVNGMDLGSRKNSTLIGVSFSANDMNELDRQNIDRENYRVSVESVGAGNAPLTNNFDSSLVNQSSQPVLPTSSNCYETYPMFYGDQMMGHGEPSGQYFINHGLNPSHKPVIGETPITMPPHMLINQQEVFNEGLPPIGLQVQNSEISATLAKKMGDSSFQQGSDPGDVLSLERPSPAPAQLFNGYLRNNFPEASVMVTMPEGHSLPPTKMDQIQDYEEASSTSSSAFGPAYVDSHPNGVDLSSLHPPPLPRRVYYSERIPREQVELLNRSSKSDDAHSSQFHVSDLLSDVNPPDSVTETGDNLHDANNQMNSELTENVNPELKQVLPDNEGSKDVLHKDNVVRLETEIYYKDNHNKPLLDETKDSKSHFPTLHQVSSVKHHDDPASNLPDIDWGDTSVKEPNEDFNVQTLPVSSNGNTTTKDDSQDFHSNVVSKQAQGDILIDINDRFPRQLLSDMFSKAILEEYPSGIHPLTSDGVGLSINMENHEPKPWSYFQKLAQEGIDNVSLIDQDHLGFLPAVGTMVGDNGTQHVAPLTTDEVSLNHAESHLNFGEENQEDIHGKIGKETSVLKSNYDHSQVNDTESMQFDAMLENLRAQESESEVGKFETRNSDLPPLDPSLGEFDMSTLQVIMNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNYCDHEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAARETKTHKASK 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 510 542 - -
Gabi813g00001 1210 ProSitePatterns Protein kinases ATP-binding region signature. 936 961 IPR017441 GO:0005524
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 562 603 - -
Gabi813g00001 1210 PRINTS Tyrosine kinase catalytic domain signature 1049 1067 IPR001245 GO:0004672|GO:0006468
Gabi813g00001 1210 PRINTS Tyrosine kinase catalytic domain signature 1012 1025 IPR001245 GO:0004672|GO:0006468
Gabi813g00001 1210 PRINTS Tyrosine kinase catalytic domain signature 1120 1142 IPR001245 GO:0004672|GO:0006468
Gabi813g00001 1210 PRINTS Tyrosine kinase catalytic domain signature 1164 1186 IPR001245 GO:0004672|GO:0006468
Gabi813g00001 1210 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1055 1067 IPR008271 GO:0004672|GO:0006468
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 1 26 - -
Gabi813g00001 1210 SMART PB1_new 185 272 IPR000270 GO:0005515
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 451 470 - -
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 893 912 - -
Gabi813g00001 1210 Gene3D Transferase(Phosphotransferase) domain 1 1018 1210 - -
Gabi813g00001 1210 Gene3D Phosphorylase Kinase; domain 1 923 1017 - -
Gabi813g00001 1210 Gene3D - 189 272 - -
Gabi813g00001 1210 CDD PB1_UP2 174 270 - -
Gabi813g00001 1210 ProSiteProfiles Protein kinase domain profile. 930 1195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 575 603 - -
Gabi813g00001 1210 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1018 1210 - -
Gabi813g00001 1210 SMART serkin_6 930 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi813g00001 1210 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 923 1017 - -
Gabi813g00001 1210 PANTHER SERINE-THREONINE PROTEIN KINASE 215 1194 - -
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 510 525 - -
Gabi813g00001 1210 Pfam Protein tyrosine and serine/threonine kinase 931 1193 IPR001245 GO:0004672|GO:0006468
Gabi813g00001 1210 MobiDBLite consensus disorder prediction 702 721 - -
Gabi813g00001 1210 Pfam PB1 domain 187 270 IPR000270 GO:0005515
Gabi813g00001 1210 CDD STKc_MAP3K-like 936 1193 - -
Gabi813g00001 1210 SUPERFAMILY Protein kinase-like (PK-like) 919 1192 IPR011009 -
Gabi813g00001 1210 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 190 272 - -
Gabi813g00001 1210 SUPERFAMILY CAD & PB1 domains 186 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi813g00001 Gabi-Chr813 44700 57996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi813g00001 1 1122 MAP Kinase Kinase Kinase AT1G79570 45.185 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gabi813g00001 PK_Tyr_Ser-Thr 2.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi813g00001 - - gmx:100799639 1967.97