Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi811g00001 ATGGGTGCTGGAGGTCCTGATGATGAGGATAGTAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTCGTTCAATGCAAGTTGCACGCTGATTCACACAAGAGCGAGTGTAATATGTATTGTTTGGATTGTATGAATGGTGCTCTATGCTCTCTCTGTCTCGCTTACCACAAAGATCACCGTGCTATCCAGATAAGGAGGTCCTCATACCATGATGTGATTAGGGTCAATGAGATTCAGAAGGTGTTGGACATCACAGGGGTCCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGGAAAGGAGTCACCAACACTTGTGAAGTCTGTGAACGTAGCCTTCTTGATTCCTACCGATTCTGTTCTCTGGGGTGCAAGATTGTTGGAACTTCAAGGAATTTTCAGAAGAAGTCAGCGGCAATGTCATCAGACTCTGAGAATTCATACAGCAGCAGTAGCAGCCATGGCAGACTGAAGAATAACAAATTGCAGAGCTTCACTCCTTCAACACCACCCCCAACTTCAGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGGCTAGTCATAGAGTACTAG 642 0.4688 MGAGGPDDEDSRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFQKKSAAMSSDSENSYSSSSSHGRLKNNKLQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi811g00001 213 MobiDBLite consensus disorder prediction 152 190 - -
Gabi811g00001 213 Pfam PLATZ transcription factor 69 140 IPR006734 -
Gabi811g00001 213 MobiDBLite consensus disorder prediction 152 202 - -
Gabi811g00001 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi811g00001 Gabi-Chr811 12501 14803 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi811g00001 PLATZ 5.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi811g00001 - - pvu:PHAVU_003G2848001 394.045