Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi80g00013 ATGGAGTTAACTCCAAGAGGAAGAAATCAAGGCCATGTCTTGAACTTTGATAGAGATGCAGATTCTTTTGTGGAGGAAGATAAGGAGCTTCTGTCAAAGTGGGCTGCTATAGAAAAATTACCCACTTTCAAACGAATTAAAACTTCTTTTGTTGATGTCAGTCAGGAAGAGACTGAAAGCAGTAGCAGCAAGGATGTGAGGTTGATGTTACAAAGCAGTAGCAGAAGGGTGGTTGATGTTACCAAGCTTGGAGCAGTTGAAAAGCGTTTGTTAATTGACAAGCTCATAAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGAAAGAGTTAATGTGAAGTTACCTAATGTGGAGGTCAAGTACAAGAACCTGAATGTAGAAGCAGAATGTGATGTTGTTCAAGGGAAGCCACTACCTACTCTATGGAACTCTCTTTTTAGCTTATTTTCAGGTCTTATGAAGACTATATCCTGTAATTCTCAAGGAGCCAATATAAGCATTCTGAATGATGTCAGTGGCATCATAAAACCATCAAGGCTCACTCTTCTTCTTGGTCCACCAGGCTGTGGGAAAACGACCTTGTTAATGGCACTGGCCGGAAAACTAGACCAATCTCTCAAGGTCACTGGAGAAATCTCTTACAATGGTTGCAAGCTAGACGAATTTGTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACATTCCTGAGATGACAGTCAGAGAAACAATTGACTTTTCGGCACGCTGTCAGGGGGTTGGAAGCAGAGCTGATATAATGGCTGAAATCACTAGGAGAGAAATAGAAGAAGGAATCATCCCTGACCCAGATATTGACACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGTGAAAATCTTCAAACAGAATATGTTTTAAAGATTCTCGGACTGGATATCTGTGCTGACACACTGGTTGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTGGGTCCAATAAAAGCTCTTTTTATGGATGAAATATCAACTGGTTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTCCAGCAATTGGTGCACATCACAGATGCAACTGCAGTGCTTTCACTTCTTCAACCAGCACCAGAAACCTTTGAGTTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCTGCAGTCAAGCACTCCAATTTTTCAAGGATTGTGGTTTCTGGTGTCCAGAAAGAAAAGGAGTGGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACAGATGTTCCTTACAATTATGTTTCAGTAGATGAGTTCTGTCAAATCTTCAAAACAAGTTATTGGGGACGGATGTTAGATGATGAGCTCTCACAGCCATATGATAAATCACAATCCCATATAAATCCTTTATCATTTAGCAAGTACTCCTTGGGAAAATGGGAATTGTTTAAAGCTTGTATGAGGAGAGAACTTCTCCTCATGAGACGAAACTCATTTATCTATATATTTAAAACTGTACAGCTTACAATCACTGCAATCATAACAATGACAGTGTTCTTACGTACTCAGTCGGCTGTGGACTTGATAGGTGCAAACTATTTATTGGGATCATTGTACTACACACTTGTTCGCCTCATGACTAATGGAGTTGCTGAGTTAATCATGACTATTACTAGACTCCCTGTTGTTTATAAGCAGAAGGCATTTTATCTTTATCCAGCTTGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAGTTCTTGATTCTATTGTTTGGACATCAGTGACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCTTGCGCCAGTTTCTTTTGCTTGTCACTTTGCATATGTCATCAACCTCCATGTGTCGTTGCCTTGCCTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTATTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTGCCATGGTGGTTGAGGTGGGGTTTTTGGCTTTCTCCCATGACATATGGGGAAATAGGAATAACACTGAATGAATTTCTTGCTCCTCGCTGGCAGAAGATCCAAGAGGGAAACATCACCATAGGAAGGGAGGTTCTTAGTAGTCGTGGTTTAGACTTTGATAGCAACTTCTACTGGCTATCAGTTGGAGTCTTACTTGGTTTCACAGTTCTATTTGATTTTGGATTTATCTTGGCATTAACATACTTAAAAGAGCCCAAGACATCTAGAGCTTTAGTTTCAAAAAAGAGGCTCTCTCAACTAAAGGGAGGAGAAAGAAGCGAAAGCGTGGAACTAAAAAATAAGTCAATCACAGTTGATATTAGCCGCACATCAAAGGAAACTCAAAGCACAGGGAAAATGGTCCTGCCCTTTGAGCCACTGACAATAACATTTAAGGATGTCCAGTATTTTGTTGACACCCCTCCGGAGATGAAAAAACATGGTTCCAATGAGAAAAAACTACAATTGCTCCGTGATATCACAGGAGCCTTCAGGCCAGGAATACTTAGTGCACTGATGGGAGTCAGTGGAGCAGGGAAAACAACTCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGTGGATACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAACAGAACGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCACGTACTCAGCTTGGTTGCGGTTGCCTACAGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATTGTTTAGTTGGCATCCCAGGCCAAAGTGGCTTATCTACCGAACAACGTAAAAGACTAACCATTGCCGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCTACATCAGGTTTGGATGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGGACCACGGTTTGCACTATACATCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTCATGAAATCTGGAGGACAGATTATTTACAGTGGAATGCTAGGTCATCATTCAAGTAGACTAATTGAATATTTTCAGAATATACCTGGAGTGCCAAAGATCAAGGACAATTATAATCCTGCAACTTGGATGTTGGAAGCTACCTCTGCATCTGTAGAACAAGAACTTAAAATAGATTTTGCAGAAATCTATAAAGAGTCACACCTTCACCGGGATACCCTTGAATTGGTGAGAGAGCTAAGTGAACCACAGCCAGATTCAAGAGACTTACACTTCTCAACTCGCTTCCCTCAAAGTACCTTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAATACGTTTCGTGTTCATGGTTGTTGCAGCAATAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAAGAAATAAACAATCAGCAGGATTTGTTCAACGTACTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGTTCAACAATTCTACCATACGTGGCAACTGAGCGCAGTGTTTTGTATCGAGAAAAGTTTGCGGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTGCAAGCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCCATTGGTCAGTTCAGAAAGTCTTTTGGTATTTCTACACCACATTCTGTACATTTTTATACTTCACATATCTGGGAATGCTGATAATGTCATTGAGCTCAAATCTGGACATAGCTTCGGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATTTGCCCTACAGCTTGGTCCCTGAATGGCCTCCTAACTTCACAATATGGAGACATGGACAAGGAGATACTCATATTTGGGGAGCAAAAACCAGTTGGTTCCTTTCTAAAAGATTACTACGGATTTCGGCATGACAGATTAAGCATTGTGGCCGTGGTGCTCATTGCTTTTCCAATCATTTATGCCTCTCTCTTTGCCTATTGCATTGGGAAAATGAATTTCCAAAAGAGATAA 4320 0.4044 MELTPRGRNQGHVLNFDRDADSFVEEDKELLSKWAAIEKLPTFKRIKTSFVDVSQEETESSSSKDVRLMLQSSSRRVVDVTKLGAVEKRLLIDKLIKHIENDNLQLLQKLRERMERVNVKLPNVEVKYKNLNVEAECDVVQGKPLPTLWNSLFSLFSGLMKTISCNSQGANISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLDQSLKVTGEISYNGCKLDEFVPQKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRADIMAEITRREIEEGIIPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADTLVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPCSQALQFFKDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDVPYNYVSVDEFCQIFKTSYWGRMLDDELSQPYDKSQSHINPLSFSKYSLGKWELFKACMRRELLLMRRNSFIYIFKTVQLTITAIITMTVFLRTQSAVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDSIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRCLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPWWLRWGFWLSPMTYGEIGITLNEFLAPRWQKIQEGNITIGREVLSSRGLDFDSNFYWLSVGVLLGFTVLFDFGFILALTYLKEPKTSRALVSKKRLSQLKGGERSESVELKNKSITVDISRTSKETQSTGKMVLPFEPLTITFKDVQYFVDTPPEMKKHGSNEKKLQLLRDITGAFRPGILSALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPTEIDSVTKGKFVEEVLETIELDDIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYSGMLGHHSSRLIEYFQNIPGVPKIKDNYNPATWMLEATSASVEQELKIDFAEIYKESHLHRDTLELVRELSEPQPDSRDLHFSTRFPQSTLGQFMACLWKQHLSYWRSPEYNLIRFVFMVVAAIIFGAVFWQKGKEINNQQDLFNVLGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFTYLGMLIMSLSSNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEILIFGEQKPVGSFLKDYYGFRHDRLSIVAVVLIAFPIIYASLFAYCIGKMNFQKR 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi80g00013 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 432 IPR003439 GO:0005524
Gabi80g00013 1439 CDD ABCG_PDR_domain2 836 1074 IPR034003 -
Gabi80g00013 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 432 IPR027417 -
Gabi80g00013 1439 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 22 1439 - -
Gabi80g00013 1439 SMART AAA_5 876 1068 IPR003593 GO:0016887
Gabi80g00013 1439 SMART AAA_5 184 417 IPR003593 GO:0016887
Gabi80g00013 1439 Pfam Plant PDR ABC transporter associated 727 789 IPR013581 -
Gabi80g00013 1439 Coils Coil 107 127 - -
Gabi80g00013 1439 Pfam ABC transporter 867 1019 IPR003439 GO:0005524
Gabi80g00013 1439 Pfam ABC-transporter N-terminal 99 150 IPR029481 -
Gabi80g00013 1439 Pfam ABC-2 type transporter 1048 1116 IPR043926 GO:0140359
Gabi80g00013 1439 Pfam ABC-2 type transporter 390 444 IPR043926 GO:0140359
Gabi80g00013 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 1074 IPR027417 -
Gabi80g00013 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 839 1092 IPR003439 GO:0005524
Gabi80g00013 1439 Pfam ABC-2 type transporter 511 722 IPR013525 GO:0016020|GO:0140359
Gabi80g00013 1439 Pfam ABC-2 type transporter 1165 1377 IPR013525 GO:0016020|GO:0140359
Gabi80g00013 1439 Gene3D - 853 1085 IPR027417 -
Gabi80g00013 1439 Gene3D - 160 425 IPR027417 -
Gabi80g00013 1439 FunFam ABC transporter G family member 34 853 1085 - -
Gabi80g00013 1439 FunFam ABC transporter G family member 34 162 466 - -
Gabi80g00013 1439 Pfam ABC transporter 175 357 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi80g00013 Gabi-Chr80 86239 96442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi80g00013 864 1051 Calmodulin-binding Proteins AT2G36910 28.571 3.62e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi80g00013 K08711 - gmx:100779615 2553.47