Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi80g00011 | ATGGAGTTAACTCCAAGAGGAAGAAATCAAGGCCATGTCTTGAACTTTGATAGAGATGCAGATTCTTTTGTGGAGGAAGATAAGGAGCTTCTGTCAAAGTGGGCTGCTATAGAAAAATTACCCACTTTCAAACGAATTAAAACTTCTTTTGTTGATGTCAGTCAGGAAGAGACTGAAAGCAGTAGCAGCAAGGATGTGAGGTTGATGTTACAAAGCAGTAGCAGAAGGGTGGTTGATGTTACCAAGCTTGGAGCAGTTGAAAAGCGTTTGTTAATTGACAAGCTCATAAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGAAAGAGTTAATGTGAAGTTACCTAATGTGGAGGTCAAGTACAAGAACCTGAATGTAGAAGCAGAATGTGATGTTGTTCAAGGGAAGCCACTACCTACTCTATGGAACTCTCTTTTTAGCTTATTTTCAACTATATCCTGTAATTCTCAAGGAGCCAATATAAGCATTCTGAATGATGTCAGTGGCATCATAAAACCATCAAGGCTCACTCTTCTTCTTGGTCCACCAGGCTGTGGGAAAACGACCTTGTTAATGGCACTGGCCGGAAAACTAGACCAATCTCTCAAGGTCACTGGAGAAATCTCTTACAATGGTTGCAAGCTAGACGAATTTGTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACATTCCTGAGATGACAGTCAGAGAAACAATTGACTTTTCGGCACGCTGTCAGGGGGTTGGAAGCAGAGCTGATATAATGGCTGAAATCACTAGGAGAGAAATAGAAGAAGGAATCATCCCTGACCCAGATATTGACACCTATATGAAGATTCTCGGACTGGATATCTGTGCTGACACACTGGTTGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTGGGTCCAATAAAAGCTCTTTTTATGGATGAAATATCAACTGGTTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTCCAGCAATTGGTGCACATCACAGATGCAACTGCAGTGCTTTCACTTCTTCAACCAGCACCAGAAACCTTTGAGTTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCTGCAGTCAAGCACTCCAATTTTTCAAGGATTGTGGTTTCTGGTGTCCAGAAAGAAAAGGAGTGGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACAGATGTTCCTTACAATTATGTTTCAGTAGATGAGTTCTGTCAAATCTTCAAAACAAGTTATTGGGGACGGATGTTAGATGATGAGCTCTCACAGCCATATGATAAATCACAATCCCATATAAATCCTTTATCATTTAGCAAGTACTCCTTGGGAAAATGGGAATTGTTTAAAGCTTGTATGAGGAGAGAACTTCTCCTCATGAGACGAAACTCATTTATCTATATATTTAAAACTGTACAGCTTACAATCACTGCAATCATAACAATGACAGTGTTCTTACGTACTCAGTCGGCTGTGGACTTGATAGGTGCAAACTATTTATTGGGATCATTGTACTACACACTTGTTCGCCTCATGACTAATGGAGTTGCTGAGTTAATCATGACTATTACTAGACTCCCTGTTGTTTATAAGCAGAAGGCATTTTATCTTTATCCAGCTTGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAGTTCTTGATTCTATTGTTTGGACATCAGTGACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCTTGCGCCAGTTTCTTTTGCTTGTCACTTTGCATATGTCATCAACCTCCATGTGTCGTTGCCTTGCCTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTATTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTGCCATGGTGGTTGAGGTGGGGTTTTTGGCTTTCTCCCATGACATATGGGGAAATAGGAATAACACTGAATGAATTTCTTGCTCCTCGCTGGCAGAAGATCCAAGAGGGAAACATCACCATAGGAAGGGAGGTTCTTAGTAGTCGTGGTTTAGACTTTGATAGCAACTTCTACTGGCTATCAGTTGGAGTCTTACTTGGTTTCACAGTTCTATTTGATTTTGGATTTATCTTGGCATTAACATACTTAAAAGGAGCCTTCAGGCCAGGAATACTTAGTGCACTGATGGGAGTCAGTGGAGCAGGGAAAACAACTCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGTGGATACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAACAGAACGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCACGTACTCAGCTTGGTTGCGGTTGCCTACAGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATTGTTTAGTTGGCATCCCAGGCCAAAGTGGCTTATCTACCGAACAACGTAAAAGACTAACCATTGCCGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCTACATCAGGTTTGGATGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGGACCACGGTTTGCACTATACATCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTCATGAAATCTGGAGGACAGATTATTTACAGTGGAATGCTAGGTCATCATTCAAGTAGACTAATTGAATATTTTCAGAATATACCTGGAGTGCCAAAGATCAAGGACAATTATAATCCTGCAACTTGGATGTTGGAAGCTACCTCTGCATCTGTAGAACAAGAACTTAAAATAGATTTTGCAGAAATCTATAAAGAGTCACACCTTCACCGGGATACCCTTGAATTGGTGAGAGAGCTAAGTGAACCACAGCCAGATTCAAGAGACTTACACTTCTCAACTCGCTTCCCTCAAAGTACCTTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAATACGTTTCGTGTTCATGGTTGTTGCAGCAATAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAAGAAATAAACAATCAGCAGGATTTGTTCAACGTACTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGTTCAACAATTCTACCATACGTGGCAACTGAGCGCAGTGTTTTGTATCGAGAAAAGTTTGCGGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTGCAAGCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCCATTGGTCAGTTCAGAAAGTCTTTTGGTATTTCTACACCACATTCTGTACATTTTTATACTTCACATATCTGGGAATGCTGATAATGTCATTGAGCTCAAATCTGGACATAGCTTCGGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATTTGCCCTACAGCTTGGTCCCTGAATGGCCTCCTAACTTCACAATATGGAGACATGGACAAGGAGATACTCATATTTGGGGAGCAAAAACCAGTTGGTTCCTTTCTAAAAGATTACTACGGATTTCGGCATGACAGATTAAGCATTGTGGCCGTGGTGCTCATTGCTTTTCCAATCATTTATGCCTCTCTCTTTGCCTATTGCATTGGGAAAATGAATTTCCAAAAGAGATAA | 3981 | 0.4054 | MELTPRGRNQGHVLNFDRDADSFVEEDKELLSKWAAIEKLPTFKRIKTSFVDVSQEETESSSSKDVRLMLQSSSRRVVDVTKLGAVEKRLLIDKLIKHIENDNLQLLQKLRERMERVNVKLPNVEVKYKNLNVEAECDVVQGKPLPTLWNSLFSLFSTISCNSQGANISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLDQSLKVTGEISYNGCKLDEFVPQKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRADIMAEITRREIEEGIIPDPDIDTYMKILGLDICADTLVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPCSQALQFFKDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDVPYNYVSVDEFCQIFKTSYWGRMLDDELSQPYDKSQSHINPLSFSKYSLGKWELFKACMRRELLLMRRNSFIYIFKTVQLTITAIITMTVFLRTQSAVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDSIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRCLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPWWLRWGFWLSPMTYGEIGITLNEFLAPRWQKIQEGNITIGREVLSSRGLDFDSNFYWLSVGVLLGFTVLFDFGFILALTYLKGAFRPGILSALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPTEIDSVTKGKFVEEVLETIELDDIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYSGMLGHHSSRLIEYFQNIPGVPKIKDNYNPATWMLEATSASVEQELKIDFAEIYKESHLHRDTLELVRELSEPQPDSRDLHFSTRFPQSTLGQFMACLWKQHLSYWRSPEYNLIRFVFMVVAAIIFGAVFWQKGKEINNQQDLFNVLGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFTYLGMLIMSLSSNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEILIFGEQKPVGSFLKDYYGFRHDRLSIVAVVLIAFPIIYASLFAYCIGKMNFQKR | 1326 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi80g00011 | 1326 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 748 | 961 | IPR027417 | - | |
Gabi80g00011 | 1326 | SMART | AAA_5 | 180 | 395 | IPR003593 | GO:0016887 | |
Gabi80g00011 | 1326 | SMART | AAA_5 | 763 | 955 | IPR003593 | GO:0016887 | |
Gabi80g00011 | 1326 | Pfam | ABC-2 type transporter | 935 | 1001 | IPR043926 | GO:0140359 | |
Gabi80g00011 | 1326 | Pfam | ABC-2 type transporter | 368 | 422 | IPR043926 | GO:0140359 | |
Gabi80g00011 | 1326 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 150 | 410 | IPR003439 | GO:0005524 | |
Gabi80g00011 | 1326 | Pfam | Plant PDR ABC transporter associated | 705 | 758 | IPR013581 | - | |
Gabi80g00011 | 1326 | Coils | Coil | 107 | 127 | - | - | |
Gabi80g00011 | 1326 | PANTHER | PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 | 758 | 1326 | - | - | |
Gabi80g00011 | 1326 | Pfam | ABC-2 type transporter | 489 | 700 | IPR013525 | GO:0016020|GO:0140359 | |
Gabi80g00011 | 1326 | Pfam | ABC-2 type transporter | 1052 | 1264 | IPR013525 | GO:0016020|GO:0140359 | |
Gabi80g00011 | 1326 | Pfam | ABC transporter | 171 | 335 | IPR003439 | GO:0005524 | |
Gabi80g00011 | 1326 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 739 | 979 | IPR003439 | GO:0005524 | |
Gabi80g00011 | 1326 | Gene3D | - | 155 | 403 | IPR027417 | - | |
Gabi80g00011 | 1326 | Pfam | ABC transporter | 760 | 906 | IPR003439 | GO:0005524 | |
Gabi80g00011 | 1326 | FunFam | ABC transporter G family member 34 | 157 | 444 | - | - | |
Gabi80g00011 | 1326 | Pfam | ABC-transporter N-terminal | 99 | 150 | IPR029481 | - | |
Gabi80g00011 | 1326 | Gene3D | - | 743 | 972 | IPR027417 | - | |
Gabi80g00011 | 1326 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 167 | 410 | IPR027417 | - | |
Gabi80g00011 | 1326 | CDD | ABCG_PDR_domain1 | 167 | 392 | IPR034001 | - | |
Gabi80g00011 | 1326 | FunFam | ABC transporter G family member 34 | 751 | 972 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi80g00011 | Gabi-Chr80 | 86239 | 96442 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi80g00011 | 860 | 938 | Calmodulin-binding Proteins | AT2G36910 | 37.975 | 8.22e-06 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi80g00011 | K08711 | - | qsa:O6P43_021928 | 1793.48 |