Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi80g00011 ATGGAGTTAACTCCAAGAGGAAGAAATCAAGGCCATGTCTTGAACTTTGATAGAGATGCAGATTCTTTTGTGGAGGAAGATAAGGAGCTTCTGTCAAAGTGGGCTGCTATAGAAAAATTACCCACTTTCAAACGAATTAAAACTTCTTTTGTTGATGTCAGTCAGGAAGAGACTGAAAGCAGTAGCAGCAAGGATGTGAGGTTGATGTTACAAAGCAGTAGCAGAAGGGTGGTTGATGTTACCAAGCTTGGAGCAGTTGAAAAGCGTTTGTTAATTGACAAGCTCATAAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGAAAGAGTTAATGTGAAGTTACCTAATGTGGAGGTCAAGTACAAGAACCTGAATGTAGAAGCAGAATGTGATGTTGTTCAAGGGAAGCCACTACCTACTCTATGGAACTCTCTTTTTAGCTTATTTTCAACTATATCCTGTAATTCTCAAGGAGCCAATATAAGCATTCTGAATGATGTCAGTGGCATCATAAAACCATCAAGGCTCACTCTTCTTCTTGGTCCACCAGGCTGTGGGAAAACGACCTTGTTAATGGCACTGGCCGGAAAACTAGACCAATCTCTCAAGGTCACTGGAGAAATCTCTTACAATGGTTGCAAGCTAGACGAATTTGTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACATTCCTGAGATGACAGTCAGAGAAACAATTGACTTTTCGGCACGCTGTCAGGGGGTTGGAAGCAGAGCTGATATAATGGCTGAAATCACTAGGAGAGAAATAGAAGAAGGAATCATCCCTGACCCAGATATTGACACCTATATGAAGATTCTCGGACTGGATATCTGTGCTGACACACTGGTTGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTGGGTCCAATAAAAGCTCTTTTTATGGATGAAATATCAACTGGTTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTCCAGCAATTGGTGCACATCACAGATGCAACTGCAGTGCTTTCACTTCTTCAACCAGCACCAGAAACCTTTGAGTTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCTGCAGTCAAGCACTCCAATTTTTCAAGGATTGTGGTTTCTGGTGTCCAGAAAGAAAAGGAGTGGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACAGATGTTCCTTACAATTATGTTTCAGTAGATGAGTTCTGTCAAATCTTCAAAACAAGTTATTGGGGACGGATGTTAGATGATGAGCTCTCACAGCCATATGATAAATCACAATCCCATATAAATCCTTTATCATTTAGCAAGTACTCCTTGGGAAAATGGGAATTGTTTAAAGCTTGTATGAGGAGAGAACTTCTCCTCATGAGACGAAACTCATTTATCTATATATTTAAAACTGTACAGCTTACAATCACTGCAATCATAACAATGACAGTGTTCTTACGTACTCAGTCGGCTGTGGACTTGATAGGTGCAAACTATTTATTGGGATCATTGTACTACACACTTGTTCGCCTCATGACTAATGGAGTTGCTGAGTTAATCATGACTATTACTAGACTCCCTGTTGTTTATAAGCAGAAGGCATTTTATCTTTATCCAGCTTGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAGTTCTTGATTCTATTGTTTGGACATCAGTGACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCTTGCGCCAGTTTCTTTTGCTTGTCACTTTGCATATGTCATCAACCTCCATGTGTCGTTGCCTTGCCTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTATTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTGCCATGGTGGTTGAGGTGGGGTTTTTGGCTTTCTCCCATGACATATGGGGAAATAGGAATAACACTGAATGAATTTCTTGCTCCTCGCTGGCAGAAGATCCAAGAGGGAAACATCACCATAGGAAGGGAGGTTCTTAGTAGTCGTGGTTTAGACTTTGATAGCAACTTCTACTGGCTATCAGTTGGAGTCTTACTTGGTTTCACAGTTCTATTTGATTTTGGATTTATCTTGGCATTAACATACTTAAAAGGAGCCTTCAGGCCAGGAATACTTAGTGCACTGATGGGAGTCAGTGGAGCAGGGAAAACAACTCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGTGGATACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAACAGAACGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCACGTACTCAGCTTGGTTGCGGTTGCCTACAGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATTGTTTAGTTGGCATCCCAGGCCAAAGTGGCTTATCTACCGAACAACGTAAAAGACTAACCATTGCCGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCTACATCAGGTTTGGATGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGGACCACGGTTTGCACTATACATCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTCATGAAATCTGGAGGACAGATTATTTACAGTGGAATGCTAGGTCATCATTCAAGTAGACTAATTGAATATTTTCAGAATATACCTGGAGTGCCAAAGATCAAGGACAATTATAATCCTGCAACTTGGATGTTGGAAGCTACCTCTGCATCTGTAGAACAAGAACTTAAAATAGATTTTGCAGAAATCTATAAAGAGTCACACCTTCACCGGGATACCCTTGAATTGGTGAGAGAGCTAAGTGAACCACAGCCAGATTCAAGAGACTTACACTTCTCAACTCGCTTCCCTCAAAGTACCTTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAATACGTTTCGTGTTCATGGTTGTTGCAGCAATAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAAGAAATAAACAATCAGCAGGATTTGTTCAACGTACTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGTTCAACAATTCTACCATACGTGGCAACTGAGCGCAGTGTTTTGTATCGAGAAAAGTTTGCGGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTGCAAGCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCCATTGGTCAGTTCAGAAAGTCTTTTGGTATTTCTACACCACATTCTGTACATTTTTATACTTCACATATCTGGGAATGCTGATAATGTCATTGAGCTCAAATCTGGACATAGCTTCGGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATTTGCCCTACAGCTTGGTCCCTGAATGGCCTCCTAACTTCACAATATGGAGACATGGACAAGGAGATACTCATATTTGGGGAGCAAAAACCAGTTGGTTCCTTTCTAAAAGATTACTACGGATTTCGGCATGACAGATTAAGCATTGTGGCCGTGGTGCTCATTGCTTTTCCAATCATTTATGCCTCTCTCTTTGCCTATTGCATTGGGAAAATGAATTTCCAAAAGAGATAA 3981 0.4054 MELTPRGRNQGHVLNFDRDADSFVEEDKELLSKWAAIEKLPTFKRIKTSFVDVSQEETESSSSKDVRLMLQSSSRRVVDVTKLGAVEKRLLIDKLIKHIENDNLQLLQKLRERMERVNVKLPNVEVKYKNLNVEAECDVVQGKPLPTLWNSLFSLFSTISCNSQGANISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLDQSLKVTGEISYNGCKLDEFVPQKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRADIMAEITRREIEEGIIPDPDIDTYMKILGLDICADTLVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPCSQALQFFKDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDVPYNYVSVDEFCQIFKTSYWGRMLDDELSQPYDKSQSHINPLSFSKYSLGKWELFKACMRRELLLMRRNSFIYIFKTVQLTITAIITMTVFLRTQSAVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDSIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRCLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPWWLRWGFWLSPMTYGEIGITLNEFLAPRWQKIQEGNITIGREVLSSRGLDFDSNFYWLSVGVLLGFTVLFDFGFILALTYLKGAFRPGILSALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPTEIDSVTKGKFVEEVLETIELDDIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYSGMLGHHSSRLIEYFQNIPGVPKIKDNYNPATWMLEATSASVEQELKIDFAEIYKESHLHRDTLELVRELSEPQPDSRDLHFSTRFPQSTLGQFMACLWKQHLSYWRSPEYNLIRFVFMVVAAIIFGAVFWQKGKEINNQQDLFNVLGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFTYLGMLIMSLSSNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEILIFGEQKPVGSFLKDYYGFRHDRLSIVAVVLIAFPIIYASLFAYCIGKMNFQKR 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi80g00011 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 748 961 IPR027417 -
Gabi80g00011 1326 SMART AAA_5 180 395 IPR003593 GO:0016887
Gabi80g00011 1326 SMART AAA_5 763 955 IPR003593 GO:0016887
Gabi80g00011 1326 Pfam ABC-2 type transporter 935 1001 IPR043926 GO:0140359
Gabi80g00011 1326 Pfam ABC-2 type transporter 368 422 IPR043926 GO:0140359
Gabi80g00011 1326 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 410 IPR003439 GO:0005524
Gabi80g00011 1326 Pfam Plant PDR ABC transporter associated 705 758 IPR013581 -
Gabi80g00011 1326 Coils Coil 107 127 - -
Gabi80g00011 1326 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 758 1326 - -
Gabi80g00011 1326 Pfam ABC-2 type transporter 489 700 IPR013525 GO:0016020|GO:0140359
Gabi80g00011 1326 Pfam ABC-2 type transporter 1052 1264 IPR013525 GO:0016020|GO:0140359
Gabi80g00011 1326 Pfam ABC transporter 171 335 IPR003439 GO:0005524
Gabi80g00011 1326 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 739 979 IPR003439 GO:0005524
Gabi80g00011 1326 Gene3D - 155 403 IPR027417 -
Gabi80g00011 1326 Pfam ABC transporter 760 906 IPR003439 GO:0005524
Gabi80g00011 1326 FunFam ABC transporter G family member 34 157 444 - -
Gabi80g00011 1326 Pfam ABC-transporter N-terminal 99 150 IPR029481 -
Gabi80g00011 1326 Gene3D - 743 972 IPR027417 -
Gabi80g00011 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 410 IPR027417 -
Gabi80g00011 1326 CDD ABCG_PDR_domain1 167 392 IPR034001 -
Gabi80g00011 1326 FunFam ABC transporter G family member 34 751 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi80g00011 Gabi-Chr80 86239 96442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi80g00011 860 938 Calmodulin-binding Proteins AT2G36910 37.975 8.22e-06 48.5