Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi806g00005 ATGGATTTGCTTCTACAAGCAAAAACCACACTAGAACCATTCCGCATGACACTCTTGTTCATTATCCCAACGATGTTGCTTCTGGGTATATTATCACGAATTCGCCGAAGAGCACCATATCCACCAGGACCAAAAGGCTTACCCATCATAGGCAACATGAACATGATGGACAAGTTAACACATAGGGGTTTAGCAAACCTAGCAAACCAATACGGCGGCGTTTTCCACCTCCGCATGGGGTTCCTTCACATGGTGGCAATTTCAAACGCAGAAGCAGCACGACAAGTGCTTCAAGTTCAAGACAACATCTTCTCCAATCGCCCTGCAACCATAGCCATAACCTACCTCACTTACGACCGTGCTGACATGGCATTTGCACACTACGGTCCCTTCTGGCGCCAGATGCGTAAGCTTTGTGTCATGAAACTCTTCAGCCGCAAGCGTGCTGAGTCATGGCAATCCGTTAGAGATGAAGTCGACGGCGTCGTTAACGTCGTTATGAACAACCTCGGCAAGCCCGTTAACATAGGGGAACTTGTGTTTAATCTCACGAAGAACATCATTTATCGTTCTGCTTTCGGGTGTAGCTCGCAGGAAGGACAAGACGAGTTCATTGCGATATTACAGGAGTTTTCTAAGTTGTTTGGTGCTTTTAATGTTGGTGATTTTGTTCCGTTTCTTGGGTGGATTGATCCACAAGGTCTCCATGCTCGGCTTGTTAAGGCTCGTGGTGCTTTGGATAGTTTTATAGATAAGATTATCGATGAACATATGGTGAAAAAGAAGAATATGAGTGATTGTGGTGGTGATGGTGATGGTGATGAAGAAACTGACATGGTTGATGAGTTGTTAGCTTTTTACAGCGATGAGGCTAAAGTGAATAATGAATCTGATGATTTGCAGAACTCCATCAAACTCACCAAGGATAACATCAAAGCCATCATCATGGACGTGATGTTCGGAGGGACAGAGACAGTGGCGTCGGCGATAGAGTGGGCCATGGCGGAGCTCATGCGAAACCCAGAAGACCTAAAGCGCGTGCAACAAGAACTCGCCGACGTGGTGGGCCTGGACCGGCGCGTGGAGGAGCGAGACTTCGACAAACTCACCTACCTGAAATGCGTCATCAAGGAGACGCTGCGCCTGCACCCGCCGATCCCGCTTCTCCTCCACGAGACGGCGGAGGACGCGGCGGTGGCCGGCTACTTCGTCCCGAAGGGTTCGCGCGTGATGATAAACGCGTGGGCAATCGGGAGGGACAAGGACTCGTGGGAGGATCCGGAAGCGTTCAAGCCGTCGCGGTTCCTGAACCCGGGCGTGCCCGATTTCAAAGGGAACAATTTTGAGTTTGTTCCATTCGGGTCGGGTCGGAGGTCCTGCCCCGGGATGCAGCTGGGTCTGTACGCGCTGGAGCTGGCGGTGGCTCACATGGTTCATTGCTTCACGTGGGAGTTACCGGATGGCATGAAGCCCAGCGAGTTAGATATGAGTGACGTGTTCGGACTCACCGCTCCCAGGGCGAGTCGACTCGTTGCCGTTCCCTCTAAGCGTGTCGCGTGCCCTCTATAA 1569 0.5124 MDLLLQAKTTLEPFRMTLLFIIPTMLLLGILSRIRRRAPYPPGPKGLPIIGNMNMMDKLTHRGLANLANQYGGVFHLRMGFLHMVAISNAEAARQVLQVQDNIFSNRPATIAITYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDGVVNVVMNNLGKPVNIGELVFNLTKNIIYRSAFGCSSQEGQDEFIAILQEFSKLFGAFNVGDFVPFLGWIDPQGLHARLVKARGALDSFIDKIIDEHMVKKKNMSDCGGDGDGDEETDMVDELLAFYSDEAKVNNESDDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRNPEDLKRVQQELADVVGLDRRVEERDFDKLTYLKCVIKETLRLHPPIPLLLHETAEDAAVAGYFVPKGSRVMINAWAIGRDKDSWEDPEAFKPSRFLNPGVPDFKGNNFEFVPFGSGRRSCPGMQLGLYALELAVAHMVHCFTWELPDGMKPSELDMSDVFGLTAPRASRLVAVPSKRVACPL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi806g00005 522 SUPERFAMILY Cytochrome P450 41 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 FunFam Cytochrome P450 84A1 33 516 - -
Gabi806g00005 522 Gene3D Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PANTHER CYTOCHROME P450 84A1-RELATED 12 522 - -
Gabi806g00005 522 Pfam Cytochrome P450 41 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 CDD CYP71-like 70 510 - -
Gabi806g00005 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Gabi806g00005 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi806g00005 522 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi806g00005 Gabi-Chr806 33433 37147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi806g00005 48 522 Monolignol Biosynthesis Gene Families AT4G36220 76.421 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi806g00005 K09755 - gmx:100807448 864.374