Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi799g00018 ATGTTTACCTTCAACCCTTCTTCCAACCCACACCCCATTTCCTCAGAACTTTCATCTTCATTTGACACATCATCGCCGGTGTCCGGAACCTCTAGCAGGGTGGCATTTTCCGACGAGGAGGTACTGCTGGCGGCGAGGAACCCAAAGAAGCGTGCGGGGAGGAAGAAATACAAGGAAACTCGCCACCCTGTGTATAGGGGCGTGAGGAGGAAGAACCCAGATAAGTGGGTTTGTGAAGTGAGAGAGCCAAACAAGAATAAAAGGATTTGGCTAGGGACTTTTCCCACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCCGCTATGGCTCTGAGGGGCCGGTCTGCTTGTCTTAACTTTGCTGACTCTGCATGGCGGCTTCCTGTCCCTGCCACAGCCGAGGCTAAGGATATTCAAAAAGTTGCTGCGGAAGCAGCAGAGGCTTTCCGGCCACCGCAGAACGATACTGTTGAGGCGGTGGCAACCACGGAGGAGGAAGAAAAGACAGTGTCGGAGATGACACAGTTGTTGAGAAATATGCCACTCATGTCCCCAACACATAGCTTGGGGTTTGAGTATGAATATGCTGACATGGATGTTCAAGATGCTGACGTGTCACTATGGAGTTTTTCAATTTAA 639 0.518 MFTFNPSSNPHPISSELSSSFDTSSPVSGTSSRVAFSDEEVLLAARNPKKRAGRKKYKETRHPVYRGVRRKNPDKWVCEVREPNKNKRIWLGTFPTAEMAARAHDVAAMALRGRSACLNFADSAWRLPVPATAEAKDIQKVAAEAAEAFRPPQNDTVEAVATTEEEEKTVSEMTQLLRNMPLMSPTHSLGFEYEYADMDVQDADVSLWSFSI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi799g00018 212 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 18 210 IPR045277 GO:0003700
Gabi799g00018 212 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Gabi799g00018 212 MobiDBLite consensus disorder prediction 1 33 - -
Gabi799g00018 212 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Gabi799g00018 212 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Gabi799g00018 212 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Gabi799g00018 212 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Gabi799g00018 212 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Gabi799g00018 212 SUPERFAMILY DNA-binding domain 64 123 IPR016177 GO:0003677
Gabi799g00018 212 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Gabi799g00018 212 FunFam Ethylene-responsive transcription factor 2 63 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi799g00018 Gabi-Chr799 157369 158007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi799g00018 36 210 AP2-EREBP Transcription Factor Family AT1G63030 54.144 1.78e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi799g00018 AP2 5.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi799g00018 - - gmx:547622 294.278