Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi799g00007 ATGGCTGTTGCCAAGAGCAACAGCAACAGTGGACCTTGTACTTCATATAATTGTTACAAAGTAGCAGGCTTGACTGAAACCATATTAGACACAAACCATACCTCTAATTTGAAAGATAGGTACATTCTTGGGGAGCAGTTAGGTTGGGGACAGTTTGGTGTGATAAGAGCATGCTCTGACAAGTTGTCAGGAGAGGTTTTAGCTTGCAAATCAATTGCTAAAGATAGACTGGTTACTTTGGATGATCTGAGAAGTGTCAAGCTTGAGATTGAGATAATGGCTAGGCTATCTGGGCATCCAAATGTTGTGGATCTCAAGGCAGTTTATGAAGAAGAAGGGTTTGTTCATTTGGTTATGGAGCTTTGTGCTGGAGGGGAGCTGTTTCACCGGTTAGAGAAGCATGGAAGGTTTTCTGAATCTGAAGCCAGAGTTATCTTTAGGCACCTAATGCAGGTGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCCTATCGACAAGAGCCTCTTCATCTCCAATTAAATTGGCTGATTTTGGGCTTGCAACTTACATTAAGCCTGCAGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTCTATATAGCTCCAGAGGTACTTGCTGGTGCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGGGTTATTCTTTACATTCTATTGAGTGGGATGCCTCCATTTTGGGGGAAGACCAAATCGCGGATATTTGAAGCTGTTAAGGCTGCTTCCCTTAGGTTCCCATCGGAACCTTGGGATCGCATTTCTCAATCTGCTAAGGATTTGATCAGGGGAATGCTGTGTACAGAACCTTCTCGAAGGCTTACTGCTCAAGGGGTTTTAGATCATTGCTGGATGGAAAGCAATCAAACAAATACTGAACAACTAAGTACACATAAAATCCGACGTTGTGAAGAATGGGATGTTGGTGGCAGCTCATTCTCTGCCTCTTTTATGTCCAGGAATCAGGACATCAGCTTTGGCACGGGATCGCCTACTTGTGATGCTCAATCAACTACATTCACTTGCAGATCATCGTTTTCTTCTTTTTTTGTGGAACCGGTTACTCCTTGTTTAATTTCTGGTGGGTTTTCATTTCGGAGCACAGACGATTCAACAAGTTTGGAATTTTCTTCTCCTGTTGTTCCCTCGATGCTTAGCTTTTCATTTCTTAGCCCCAGTTCTGTTGTTGGGAAAAAGAGTTGTAATTTAGAGTGCTCAGCTAACATGTCAGATGTAAATGCAATTGCTGGAGAAGCAAGCTTGGGAAAGTTGCTATTACTACCAGATTCTCCCCTTTGCGTTGGACTTGATGTTAAAGAAATGGATCGCAAGGCTATAGAACCTAAAAGAGCTGGTGGAATGAATGGACATAGGGTATTGGGAATCCACAGCAAGAGAAATAGGACAATTGGACTTGGTGAGTGTGAGCAACTTGACCTTGTGGTGACTGAATCAGTCATTCGCTGGTCATCATGCACTCAACTCCCTACATCTTTGAGATCATCTCTTGTCTGCTAA 1563 0.4293 MAVAKSNSNSGPCTSYNCYKVAGLTETILDTNHTSNLKDRYILGEQLGWGQFGVIRACSDKLSGEVLACKSIAKDRLVTLDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGRFSESEARVIFRHLMQVVLYCHENGVVHRDLKPENILLSTRASSSPIKLADFGLATYIKPAGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKAASLRFPSEPWDRISQSAKDLIRGMLCTEPSRRLTAQGVLDHCWMESNQTNTEQLSTHKIRRCEEWDVGGSSFSASFMSRNQDISFGTGSPTCDAQSTTFTCRSSFSSFFVEPVTPCLISGGFSFRSTDDSTSLEFSSPVVPSMLSFSFLSPSSVVGKKSCNLECSANMSDVNAIAGEASLGKLLLLPDSPLCVGLDVKEMDRKAIEPKRAGGMNGHRVLGIHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQLPTSLRSSLVC 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi799g00007 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 322 - -
Gabi799g00007 520 SUPERFAMILY Protein kinase-like (PK-like) 38 365 IPR011009 -
Gabi799g00007 520 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Gabi799g00007 520 SMART serkin_6 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi799g00007 520 Pfam Protein kinase domain 43 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi799g00007 520 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Gabi799g00007 520 ProSiteProfiles Protein kinase domain profile. 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi799g00007 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Gabi799g00007 520 Gene3D Transferase(Phosphotransferase) domain 1 128 326 - -
Gabi799g00007 520 FunFam Phosphoenolpyruvate carboxylase kinase 128 316 - -
Gabi799g00007 520 CDD STKc_CAMK 40 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi799g00007 Gabi-Chr799 105022 108751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi799g00007 28 305 EF-hand Containing Proteins AT3G57530 48.561 1.15e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi799g00007 Pkinase 9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi799g00007 - - gmx:100776088 892.493