Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi799g00004 ATGGGTAAAGGGGGTATGTCAATTGATGATCATGGGGAAGGAAAAGATGGTGTTGAACAAGAGAATATGGCTGCTTGGCTTGTTAGTATTAACACTCTCAAGATTCAACCTTTCAAGCTTCCTCCTCTTGGACCCCATGATGTCAGGGTTAGAATGAAGGCTGTTGGTATCTGTGGGAGTGATGTTCACTACGTCAAGGCAATGAGATTGGCAGACTTTATAGTAAAAGAACCTATGGTTATTGGTCATGAGTGTGCTGGGATCATTGAAGAAGTTGGTAGTGAGGTGAAGAATTTGGAGGCTGGTGACCGTGTGGCAATTGAGCCTGGGATCAGTTGTTGGCGATGTGATCCCTGCAAACAGGGTAGATATAATTTATGCCCTGATATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCACTGGCTAATCAGGTAGTGCACCCAGCAGACCTATGTTTTAAACTGCCAGATAATGTGAGCTTGGAGGAGGGAGCAATGTGTGAACCCTTAAGTGTTGGTGTTCATGCTTGTAGGCGTGCTAATATTGGTCCAGAAACAAATGTGTTGATCATGGGAGCAGGACCCATAGGACTTGTTACAATGCTTGCAGCTCGTGCTTTTGGGGCACCCAGGATCATCATTGTGGATGTGGATGACCATCGTTTGTCTGTTGCAAAAACTCTTGGTGCAGATAATATTATCAAAGTTTCAACAAACATTCAGGATGTAGCAGAAGAAGTTGTACAGATACATAAGGTTATGGGAGCTGGTGTAGATGTTACCTTTGATTGTGCTGGTTTTAACAAAACCATGTCTACAGCATTGAGTGCAACACAGCCAGGTGGCAAAGTTTGTCTAGTGGGAATGGGTCATTCTGAAATGACTGTACCACTCACCCCAGCTGCTGCAAGGGAAGTTGATGTGATTGGCATTTTCCGCTATAAGAACACATGGCCTCTTTGCCTTGAGTTTCTAAGGAGTGGCAAAATTGATGTGAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAAAAGGAAGTGGAAGAAGCCTTTGAAATAAGTGCTCGCGGTGGTAATGCCATTAAGGTCATGTTCAATCTTTAG 1107 0.4381 MGKGGMSIDDHGEGKDGVEQENMAAWLVSINTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYVKAMRLADFIVKEPMVIGHECAGIIEEVGSEVKNLEAGDRVAIEPGISCWRCDPCKQGRYNLCPDMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIIIVDVDDHRLSVAKTLGADNIIKVSTNIQDVAEEVVQIHKVMGAGVDVTFDCAGFNKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFEISARGGNAIKVMFNL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi799g00004 368 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Gabi799g00004 368 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 332 IPR036291 -
Gabi799g00004 368 PANTHER SORBITOL DEHYDROGENASE 20 368 - -
Gabi799g00004 368 Pfam Zinc-binding dehydrogenase 196 326 IPR013149 -
Gabi799g00004 368 Gene3D - 173 313 - -
Gabi799g00004 368 CDD sorbitol_DH 24 367 IPR045306 GO:0016616
Gabi799g00004 368 FunFam Sorbitol dehydrogenase 173 313 - -
Gabi799g00004 368 SUPERFAMILY GroES-like 22 194 IPR011032 -
Gabi799g00004 368 Pfam Alcohol dehydrogenase GroES-like domain 45 156 IPR013154 -
Gabi799g00004 368 Gene3D - 33 353 - -
Gabi799g00004 368 SMART PKS_ER_names_mod 28 366 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi799g00004 Gabi-Chr799 72087 75916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi799g00004 35 301 Monolignol Biosynthesis Gene Families AT4G37980 27.338 3.67e-19 85.1