Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi796g00006 ATGGCAGTTCCACCAGAGATGGAGCATCCCAGAAAGGCTTTTGGATGGGCAGCCAAAGACACATCTGGGGTTCTGTTCCCTTTCAAGTTCTCAAGAAGGGAAACAGGAGAGAAAGATGTAACGTTCAAAGTGTTATACTGTGGCATATGCCACTCAGACCTCCACATGGTGAAGAACGAATGGGGCAATTCCACTTACCCCCTTGTGCCAGGGCATGAGATTGTAGGTGAAGTAACAGAAGTGGGAAGCAAGGTACAAAAATTCAAAGTTGGAGACAAGGTGGGTGTGGGGTGCATGGTTCAATCATGCCGCTCATGCCAAAGCTGTGATGAAAGTCTTGAGAATTACTGTCCAAAAATGATTCTAACCTATGGTGCAAAGGATGTTGATGGCACGACCACATATGGAGGCTACTCTGACCATATGGTTGCAGATGAACACTTTGTGATCCATATTCCAGATGGTTTACCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCTGGGATCACAGTGTATAGCCCTTTAAGATATTTTGGACTTGACAAGCCTGGCTTACAATTGGGTGTGGTTGGTCTTGGTGGGCTTGGCCATGTAGCTGTTAAGTTTGCTAAAGCTTTTGGGGCTAAGGTGACAGTAATTAGCACATCTAGTAACAAAAAGAAGGAAGCCATTGAACACCTTGGAGCTGACTCATTTGTTGTCAGCAGTGACCAAAATCAGATGCGGGCTGTAATGGGCACCTTGGATGGTATCATTGACACAGTTTCTGCTGTCCATCCTCTATTTCCTTTGATTGGTCTGTTGAAGACTCATGGGAAACTTGTCATGGTTGGTGCACCTGAGAAGCCTCTGGAGCTACCAGTCTTTCCTTTACTTTTGGGTAAGCATATGGAAAATAATACTATATCAGGGAGAAAGATGGTAGCTGGCAGTTGCATTGGAGGAATGAATGAGACACAAGAAATGATTGACTTTGCTGCTAAACACGATGTAAAACCTGACATTGAGGTTATTCCTATAGATTATGTGAACACTGCAATGGAGCGCCTCCTCAAAGCAGATGTGAAATATCGATTTGTGATTGACATTGGGAATACACTGAAGCCAAGCTCTTAA 1116 0.4444 MAVPPEMEHPRKAFGWAAKDTSGVLFPFKFSRRETGEKDVTFKVLYCGICHSDLHMVKNEWGNSTYPLVPGHEIVGEVTEVGSKVQKFKVGDKVGVGCMVQSCRSCQSCDESLENYCPKMILTYGAKDVDGTTTYGGYSDHMVADEHFVIHIPDGLPLDAAAPLLCAGITVYSPLRYFGLDKPGLQLGVVGLGGLGHVAVKFAKAFGAKVTVISTSSNKKKEAIEHLGADSFVVSSDQNQMRAVMGTLDGIIDTVSAVHPLFPLIGLLKTHGKLVMVGAPEKPLELPVFPLLLGKHMENNTISGRKMVAGSCIGGMNETQEMIDFAAKHDVKPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi796g00006 371 FunFam Putative cinnamyl alcohol dehydrogenase 6 334 363 - -
Gabi796g00006 371 FunFam Uncharacterized protein 16 166 - -
Gabi796g00006 371 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Gabi796g00006 371 CDD CAD1 14 362 IPR047109 GO:0016616
Gabi796g00006 371 SMART PKS_ER_names_mod 19 361 IPR020843 GO:0016491
Gabi796g00006 371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 332 IPR036291 -
Gabi796g00006 371 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Gabi796g00006 371 PANTHER ALDEHYDE REDUCTASE 5 366 IPR047109 GO:0016616
Gabi796g00006 371 Gene3D - 16 363 - -
Gabi796g00006 371 SUPERFAMILY GroES-like 21 184 IPR011032 -
Gabi796g00006 371 Pfam Zinc-binding dehydrogenase 194 326 IPR013149 -
Gabi796g00006 371 Gene3D - 167 333 - -
Gabi796g00006 371 FunFam Cinnamyl alcohol dehydrogenase 167 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi796g00006 Gabi-Chr796 158979 161693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi796g00006 11 370 Monolignol Biosynthesis Gene Families AT4G37990 72.778 4.52e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi796g00006 K23232 - qsa:O6P43_025192 596.66