Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00023 ATGCATTGTGTATATATGTTCGAGATGATTATTAACGTGAAAGAGTCGACGATGGTACGGCCGGCGGAGACGGTGGCGCGTAGGGCGTTGTGGAACTCGAATGTGGACCTGGTGGTTCCCAATTTCCACACGCCGAGCGTGTACTTCTATAGGCCCAACGGAGCCTCCAACTTCTTCGATGCCAAGGTTCTCAAGGAGGCTCTCAGCAAGGTACTCGTCCCTTTCTACCCAATGGCCGGCCGTCTCCGCCGCGACGAAGACGGCCGCGTCGAGATTGACTGCGACGGCCAAGGGGTGCTCTTCGTGGAGGCTGACACCGGCGCCGTCATCGACGATTTTGGCGACTTCGCACCAACCCTTGAGCTCCGTCAGCTTATCCCCGCCGTTGATTATTCACGCGGAATCGAAACCTATCCCCTGTTAGTGTTGCAGGTAACATATTTCAAATGTGGAGGGGTCTCACTGGGTGTTGGAATGCAACATCATGTAGCAGATGGAGCTTCTGGTCTTCACTTTATTAATACATGGTCAGATGTGGCTCGTGGCTTGGATGTTTGTATACCACCATTCATTGACCGGACACTACTCCGTGCCAGAGATCCACCTAGACCTGTTTTTGATCACATAGAATACAAGCCCCCACCAGTCATGAAGACTCACCAACAACCAACAAAACCAGGTTCAGATTATGCAGCGGTCTCAATTTTCAAACTGACTCGTGACCAACTCAGCATACTGAAAGCTAAGTCCAAAGAAGATGGCAACACAATCAGCTACAGCACTTACGAGATGTTGGCTGGTCACGTGTGGAAAAGTGTATGCAGGGCAAGAGCACTTCCAAATGATCAAGAGACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGTTGCAGCCTCCCCTCCCACCAGGTTACTTTGGCAATGTGATCTTCACGACCACACCTACAGCTATAGCAGGTGATCTCATGTCAAAACCAACATGGTATGCAGCAAGCAGAATCCACAATGCCTTGTTAAGAATGGATAACGAATATTTGAGATCGGCTCTTGATTATCTAGAGCTACAACCTGATCTAAAAGCACTGGTTCGTGGAGCACATACTTTCAAGTGTCCAAATCTTGGTATCACTAGTTGGACTAGGCTTCCAATCCATGATGCTGATTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTGCATACGAGGGGCTATCTTTCATAATTCCAAGCTCAACAAATGATGGGAGCATGTCTGTGGCAATAGCTCTCCAGCCTGAGCATATGAAAGTGTTTAAGGAATTTTTCTATGACATTTGA 1326 0.4842 MHCVYMFEMIINVKESTMVRPAETVARRALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPAVDYSRGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVCIPPFIDRTLLRARDPPRPVFDHIEYKPPPVMKTHQQPTKPGSDYAAVSIFKLTRDQLSILKAKSKEDGNTISYSTYEMLAGHVWKSVCRARALPNDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPTAIAGDLMSKPTWYAASRIHNALLRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSMSVAIALQPEHMKVFKEFFYDI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00023 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 438 - -
Gabi792g00023 441 Gene3D - 222 441 IPR023213 -
Gabi792g00023 441 Gene3D - 5 213 IPR023213 -
Gabi792g00023 441 FunFam Tryptamine hydroxycinnamoyl transferase 218 439 - -
Gabi792g00023 441 Pfam Transferase family 11 439 - -
Gabi792g00023 441 FunFam Spermidine hydroxycinnamoyl transferase 9 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00023 Gabi-Chr792 171237 177954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00023 9 441 Monolignol Biosynthesis Gene Families AT5G48930 77.829 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00023 K13065 - gmx:100820075 825.083