Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00022 ATGGGGATATACCTCAGCACCCCGAAAACAGAGAAGGCCTCTGAAGATGGTGAGAATGACAAGCTTCGATACGGTTTGTCTTCCATGCAGGGTTGGCGTGCTTCCATGGAGGATGCTCATGCAGCTCATCCATATTTGGATGATTCTACGGCTTACTTTGGTGTTTATGATGGCCATGGAGGCAAAGCAGTTTCGAAATTCTGTGCCAAGTATCTTCACCTGCAGGTGCTTAAGCATGAAGCTTACTTAGCTGGAGATTTAGGCACATCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGCGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTATCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCGAGTTGATGATTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGACCGAACTGTGGAAGTACAGCTTGTGTGGCTGTCATCCAAGGAAACAAACTTGTAGTCGCAAATGCTGGTGATTCTAGATGTGTGTTATCAAGGAAGGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGACCTTGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGTTTCATCCAAGTTGGACGTGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGACATGGAATTCAAGCAGAACAAGTATTTGCCTGCTGAAAAGCAGATTGTGACTGCTGATCCGGACATAACTTCTGTTGAGCTTTGCGATGATGACGAGTTTCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCTAGCCAACAGCTTGTGGACTTTATACATGGACAGTTAAAGACAGAGAATAAACTTTCTGTGGTTTGTGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGCGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAATCCTTCGAATACAGGTGGTGCTGTCACAAACCAACCTCAGTCGTCTGATCAACCATCCGAAGCTGATAGAAGTTCAGAGAAAATAGAAACGAAGTGA 1086 0.4438 MGIYLSTPKTEKASEDGENDKLRYGLSSMQGWRASMEDAHAAHPYLDDSTAYFGVYDGHGGKAVSKFCAKYLHLQVLKHEAYLAGDLGTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANDRVDDWAFEEGPHSDFSGPNCGSTACVAVIQGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNPSNTGGAVTNQPQSSDQPSEADRSSEKIETK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00022 361 CDD PP2Cc 23 328 IPR001932 -
Gabi792g00022 361 MobiDBLite consensus disorder prediction 1 20 - -
Gabi792g00022 361 Gene3D - 1 329 IPR036457 -
Gabi792g00022 361 MobiDBLite consensus disorder prediction 333 349 - -
Gabi792g00022 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Gabi792g00022 361 PANTHER PROTEIN PHOSPHATASE 2C 16 327 IPR015655 GO:0004722|GO:0006470
Gabi792g00022 361 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Gabi792g00022 361 MobiDBLite consensus disorder prediction 333 361 - -
Gabi792g00022 361 Pfam Protein phosphatase 2C 153 313 IPR001932 -
Gabi792g00022 361 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Gabi792g00022 361 SMART PP2C_4 13 326 IPR001932 -
Gabi792g00022 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00022 Gabi-Chr792 157717 164637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00022 1 334 PP2C-type Phosphatase Gene Family AT2G25070 75.964 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00022 K17499 - gmx:100776787 689.493