Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00020 ATGGGAGATCTGAAAGAGAGGCTTCTGCCACCAAAACCTGCATCAGCTGTTAACCTAAGAGAGTTATCAAATCGACCATCTTCATCTGGAAGACAAGTGTTTCAAGGAGTTGATGTTGTTGGGCTTAAGAAGAGAGGTCAAAGTCTCAGGTCATGGATTCGAGTTGACACGTGTGGTGACTCTCAGATAATTGAGGTAGACAAGTTTACTATGATGAGACGTTGTGATCTTCCTGCACGTGATCTTCGACTACTTGATCCTCTCTTTGTTTATCCATCAACTATACTTGGTAGAGAAAAGGCCATTGTTGTAAACCTTGAACAGATACGTTGTATTATTACAGCTGATGAAGTTCTTCTCTTGCATTCCCTTGATAGTTATGTGTTGCACTATGTGATGGAGCTTCAACGAAGACTCACAACAACTGGGGTTGTTGGTGAGCTCTGGCAGTTAGACAGTTCTGATATGAACCGTAGGAGAGGAAGTAGGGATTTTGAAAATGTCTTTAGCAACACATCCCCTGATTATTTGCCTTTTGAGTTTAGGGCTCTTGAAGTTGCACTCGAGGCTTCATGCACATTTCTTGACTCTCAGGCAGCTGAGTTAGAAATTGAAGCTTATCCGTTGTTGGATGAACTAACATCTAAAATCAGTACTCTAAATTTGGAACGTGCTCGTCGGTTAAAAAGCAGACTTGTTGCTCTCACTAGAAGGGTTCAGAAGGTTAGAGATGAAATAGAACAGCTTATGGATGATGATGGTGATATGGCTGAAATGTATCTAACTGAAAAGAAAAGACGAATGGAGTTGGCATCTAATGGAGATCAGTGTTTGTCTGGTAATAAATCAACTGATGGTGTATCCATGTCTGCTCCAGTTTCTCCTGTTTCATCTCCTCCTTCCTATGCTAGGAAGCTTGAAAAGAACTTGAGTATTGCTAGGAGTCGACATGATAGCGTGAAGAGTTCTGAAAGTTCTACAGAAAATATAGAAGAGTTTGAAATGTTGCTAGAAGCATACTTTGTAGTAATTGATAGCACCCTAAACAAGTTGACATCGTTGAAAGAATACATTGATGATACAGAAGATTTCATTAACATTCAACTGGATAATGTACGTAATCAGCTCATCCAGTTTGAGCTTTTACTCACGACTGCAACATTTGTTGTTGCCATCTTTGGCGTTGTGGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTTAAGGTCCCCTCAGCATTCCAGTGGGTCCTTGTAATTACAGGAGTTTGTGGACTCTTAATATTTTGTGCGTTTGTGTGGTTCTTCAAATACAGAAAACTCATGCCCCTGTAG 1338 0.4013 MGDLKERLLPPKPASAVNLRELSNRPSSSGRQVFQGVDVVGLKKRGQSLRSWIRVDTCGDSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLHSLDSYVLHYVMELQRRLTTTGVVGELWQLDSSDMNRRRGSRDFENVFSNTSPDYLPFEFRALEVALEASCTFLDSQAAELEIEAYPLLDELTSKISTLNLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELASNGDQCLSGNKSTDGVSMSAPVSPVSSPPSYARKLEKNLSIARSRHDSVKSSESSTENIEEFEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFKVPSAFQWVLVITGVCGLLIFCAFVWFFKYRKLMPL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00020 445 FunFam Magnesium transporter MRS2-1 383 443 - -
Gabi792g00020 445 Coils Coil 225 252 - -
Gabi792g00020 445 Gene3D Magnesium transport protein CorA, transmembrane region 383 443 - -
Gabi792g00020 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 23 443 IPR039204 -
Gabi792g00020 445 MobiDBLite consensus disorder prediction 274 297 - -
Gabi792g00020 445 MobiDBLite consensus disorder prediction 274 302 - -
Gabi792g00020 445 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 382 435 IPR045863 -
Gabi792g00020 445 CDD Mrs2_Mfm1p-like 52 442 IPR039204 -
Gabi792g00020 445 Gene3D Magnesium transport protein CorA, transmembrane region 129 376 - -
Gabi792g00020 445 FunFam Magnesium transporter MRS2-1 40 123 - -
Gabi792g00020 445 Gene3D - 38 123 - -
Gabi792g00020 445 Pfam CorA-like Mg2+ transporter protein 335 433 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00020 Gabi-Chr792 143010 146417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00020 1 445 MRS2 Gene Family AT1G16010 81.614 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00020 K16075 - gmx:100779803 743.036