Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00017 ATGCCATCAAGACCTATCCCTCCAAGTCCCAGTTTTCTCAACAAAACCAGGATCCTCTTCCTGGCACTCATCATCTCTGCATGTGTGGTGATTTTCTGCTCAGTCCTTTACTTTCTATACTATCTATGGCACTCCCTTGTACACAGAGCTAAAACTACCCCTTTTGAAGCAAGTGCTCCCTTGAAGCTCAAAAGATTCTCATACAAAGAGCTTAAGCATGCCACCAATGGCTTTGACACAGCCAATGTCATTGGTAGAGGTGGCTCTGGCACTGTTTTCAGGGGAATACTTAAAGACGGGAAGCTGGTTGCAGTGAAGCGCATGGACGCTTTGTCTTTGCAGACAGAGCGAGAGTTTCAGAATGAGTTGCAGATTCTTGGTGGGTTAAGATCACCCTTCTTGGTGACCCTTTTGGGCTATTGTGTTGAAAAGAACAAAAGAGTTTTGGTGTATGAATATATGCCTAACAGAAGCTTGCAGGAGTCCCTCTTTGGAGATGGATGCTTGTGTTTGAGTTGGGAGAGGAGATTTTGCATAATATTGGATGTTGCTAGAGGGTTGGAATTCTTGCACCATGGATGTGATCCCCCAGTGATCCATGGGGATATTAAGCCAAGCAATGTTCTACTTGATGCTGAGTACAATGGGAGGATCTCAGACTTTGGGTTGTCAAGGATTAAAGTAGAGGGTGAATTTGGTATAGATTTGTTTAGCCAGGACTTGGGGAAGAGCCAGGAATTATGGAAAAGCCAAGAGCTTTCAGCTAATCAATATTCTGAAACTCCAGCTATTGGTACTCCAGTTGAGAGTGTTAGTGAAGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCATCCAAAAATAGCAGGACGTGTTTCAATGTTGGAGCTTTGAACTTGAATTCTTTGAATTATAATGCCAATATAGCCAATGAGAGTGAAATCAGGAGTGTTAATGCAAAGGGCAAAGAAATTTCAACTTCGGATATTGGTGGGGATGATTGGAACAATAAGTTTGTTCCTTACGATGATGATTTTTCTAGCATTGATCATAGTAAGGAGCTAACTGTTAACTCTTCATTGGTGGATGATGAGAAGACAAATGGGAAACAATGGGGAAAAGACTGGTGGTGGAAACAAGATGGAAATGGTGAATTATGCAGCAAAGACTACGTCATGGAGTGGATAGGGAGTCAGATTAGTCCATCAAACCCTGATTGGGATGATGGGAAGAACAATATTCATGAGAAAATAGAGTTGGAAAATTCTAGTCCAATAGATAAACCCAATGATGCAAATGGACCCCGAATACAAGTATTCAGGATAGGAAATACTAATGATGGAATTGAGAAGAAAGAATCAAGAGGAAAGAAAAATAGTAAGAAGAAGCAAAGGAACATGCAAGAGTGTTGGAAAGAAGAGCACCATAATGAATTAAGCAAGAAGAGCAACAAGCTTAGAAAACTTCATACTAAATGGAAGAAAGGCTTGAAAGTACCACATTTTGATTTGGGTAGACGATTTTATCTTTGCAGGCGCAACAACTTCGCCGGGGAGAGACAGAATGAGTGTGATGTTGGGGAGTTTAGTTTCAGAAGAGGTTGGAAAAAGAAAAGTACTCGTTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGTGAGCTAAGCAGCACAACTAGCATGAGAGGAACACTATGTTATATTGCACCAGAGTACGGTGGATGTGGGTTCTTAATGGAGAAAGCTGACATCTACAGTTTAGGAGTTCTGATTCTTGTAATTGTGTCAGGTAGAAGACCATTACATGTTCTTGCATCCCCCATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGGCAATTGGCTAGAGTTGGTGATATTTTAGAACTAGTTGATGAGAGATTGAAAGAAGATTACAACAAGGACCAAGCAAGCTTGTGTATTAACTTGGCACTCACTTGCTTACAGAAAATTTCAGAATTGCGGCCTGATATTGGGGATATTGTTAAGATTTTAAAGGGGGAGATGGACCTTCCACCACTTCCATTTGAGCTCTCCCCTTCTCCACCTTCCAAATTATACAGAAGAACAAGGAGAAAACAGAAGGGCAATGCAGAATAG 2130 0.4127 MPSRPIPPSPSFLNKTRILFLALIISACVVIFCSVLYFLYYLWHSLVHRAKTTPFEASAPLKLKRFSYKELKHATNGFDTANVIGRGGSGTVFRGILKDGKLVAVKRMDALSLQTEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYMPNRSLQESLFGDGCLCLSWERRFCIILDVARGLEFLHHGCDPPVIHGDIKPSNVLLDAEYNGRISDFGLSRIKVEGEFGIDLFSQDLGKSQELWKSQELSANQYSETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVGALNLNSLNYNANIANESEIRSVNAKGKEISTSDIGGDDWNNKFVPYDDDFSSIDHSKELTVNSSLVDDEKTNGKQWGKDWWWKQDGNGELCSKDYVMEWIGSQISPSNPDWDDGKNNIHEKIELENSSPIDKPNDANGPRIQVFRIGNTNDGIEKKESRGKKNSKKKQRNMQECWKEEHHNELSKKSNKLRKLHTKWKKGLKVPHFDLGRRFYLCRRNNFAGERQNECDVGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYIAPEYGGCGFLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRQLARVGDILELVDERLKEDYNKDQASLCINLALTCLQKISELRPDIGDIVKILKGEMDLPPLPFELSPSPPSKLYRRTRRKQKGNAE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00017 709 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Gabi792g00017 709 Gene3D Transferase(Phosphotransferase) domain 1 154 267 - -
Gabi792g00017 709 Gene3D Transferase(Phosphotransferase) domain 1 513 681 - -
Gabi792g00017 709 SUPERFAMILY Protein kinase-like (PK-like) 58 697 IPR011009 -
Gabi792g00017 709 ProSiteProfiles Protein kinase domain profile. 78 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi792g00017 709 SMART serkin_6 78 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi792g00017 709 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Gabi792g00017 709 FunFam Receptor-like serine/threonine-protein kinase At4g25390 532 681 - -
Gabi792g00017 709 PANTHER OS07G0586332 PROTEIN 10 704 IPR044576 -
Gabi792g00017 709 MobiDBLite consensus disorder prediction 445 476 - -
Gabi792g00017 709 FunFam putative receptor-like protein kinase At1g80870 154 264 - -
Gabi792g00017 709 Coils Coil 472 492 - -
Gabi792g00017 709 Pfam Protein kinase domain 80 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi792g00017 709 FunFam Receptor-like serine/threonine-protein kinase At4g25390 47 153 - -
Gabi792g00017 709 Gene3D Phosphorylase Kinase; domain 1 50 153 - -
Gabi792g00017 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Gabi792g00017 709 MobiDBLite consensus disorder prediction 685 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00017 Gabi-Chr792 132124 134253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00017 543 675 Receptor kinase-like Gene Family AT3G58690 31.343 2.83e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gabi792g00017 Pkinase 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00017 - - gmx:100807432 1146.72