Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00011 ATGTTTGACTCTGGTTACAAGTCACAGTATATTGGAGGCCAGAAGGAAAAGTTTGTAAGGTTGGATGATCTGGATTCAAATTTGTCAATGCCATCTAGCTCAAGTGGGATGAAGAAATTAAGGTTTAATTTAGATTCTTTGCCATTGCCAATTCCTGGTCGTGGAAGAAAGAATGCATCGAAATCATTTAGGCTAGGAGTGAAGAGAGGATCAGAGGGAATAAAAACAATTGGAAGATCACTCAAAAGTGGAGTAACATGGGCAGTGTTTCCAGAAGATCTTAAAGTGTCAGAGAAAAAAGTATTTGATCCTCAAGATAAGAACCTTTTGTATTGGAACAAGTTTTTTGAGATTCTATGCATTTTTTCTGTAGCTTGTGATCCTTTCTTCTTTTATCTTCCTTATTTCAACCACAAATCATTTTGCCTCGCAATAGATAACGAGCTAGCAAGTTTTGCTGTCACACTCAGAACAATATTTGATGTTTTTTATCTCCTCCGCATAAGTTTTCAATTCCGCACTGCTTACATTGCACCTTCATCTCGGGTGTTTGGACGAGGTGAACTTGTCATTGATCCTGCAAAGATTGCTAAGAGATATTTACGACGTTACTTCATTGTTGATTTCATTTCTGTGCTTCCTGTGCCACAGATTGTAGTGTGGAAATATCTTTACAGTAACAAACGTGCACAGGTATTGGGCACAAAAACGGCACTGTTGAGAATTGTCATCCTCCAATACTTTCCAAGATTTCTACGCTTTATACCTTTAGCTTCAGAAGTTAAAAAGACAGCTGGTGTTTTTTCTGAAAATGCATTCATCGGTGCCATGTACTATTTGATCTGGTACATGCTTGCTAGTCACATAACAGGCTCTGTCTGGTACTTACTGGCCATAGAACGTAATGACACATGCTGGAAGAATGCTTGTTATGAAGTTGAAGGATGCAATACACATTTCTTGTACTGTGGGAGTTCGAATAAGCATATGTCAGGGTATGAAAGTTGGAGAAATGTCAGTGAGACTGTTCTTAAAAGTCGCTGCTTTGTTCGGGAAGATAACTCAGAATTTAATTATGGAATCTTCTCTCAAGCTATACAGTCTGATATTGTTGCTTCCATAGAAGTGTTTCCTAAATTTTGTTACTGTTTATGGTGGGGCCTTCAAAACTTGAGTACACTTGGTCAGGGGCTTCTAACCAGTACCTACCCTGGAGAGGTTATGTTTTCCATAGTAATAGCTATTATGGGGCTACTCCTTTTTTCTCTTCTGATTGGAAACATGCAGACCTACCTTCAATCAATGTCAGTTCGTCTTGAGGAAATGAGGATCAAAAGGCGTGACTCTGAGCAGTGGATGCATCATCGCTTGCTTCCTCCGGAGCTAAGGCAAAGAGTCAGACGCTATGACCAATACAAGTGGCTTAACACCCGAGGAGTAGATGAAGAGAGCTTGGTTCAAAGTCTTCCAAAAGATCTCAGGAGAGATATCAAACGGCATCTTTGTTTGAATTTGGTCAGAAGGGTTCCTCTCTTTGCTAACATGGACGAACGCTTGCTTGATGCTATATGTGAGCGATTGAAACCAAGTTTGTATACAGAGAGCACTTACATAGTTAGGGAAGGAGATCCAGTTAATGAGATGCTTTTCATCATAAGGGGTCGTCTAGAGAGTGTTACTACAGATGGCGGAAGAAGTGGATTTTTCAACAGAGGTCTTCTGAAAGAAGCTGACTTCTGTGGTGAAGAGTTACTGACATGGGCACTGGACCCAAAATCTGCTGCTAACTTGCCATCATCTACAAGAACAGTGAAGGCTATAAATGAGGTTGAGGCATTTGCTTTGGAAGCAGAGGAGTTGAAGTTTGTTGCTTCACAGTTTAGGCACATTCACAGTAGACAAGTTCAGCACACCTTCCGTTTCTACTCTCAACAGTGGAGAACATGGGCTGCAATCTTCATTCAAGCTGCATGGAGGCGCCATTATAGGAGAAAAATTGCAGAGCAGCGCAGGAAGGAGGAAGAAGAATCATATGATTCTGATTATGAAGGAGGTGATGATTCTGCAAGGGCCTTGGTTCCACATAATGAAAGTTCTTCTGGTTTTGGATTTGGTACTACTGTCTATGCTTCTCGCTTTGCTGCCAATGCACTTCGTGGTCATAGGCTACGTGTTGGAAGTTCCAGCAACTTTATGAAACTCCGAAAGCCCTCGGAACCTGACTTCAGTGTTTTTGACAAAGAGTGA 2247 0.4103 MFDSGYKSQYIGGQKEKFVRLDDLDSNLSMPSSSSGMKKLRFNLDSLPLPIPGRGRKNASKSFRLGVKRGSEGIKTIGRSLKSGVTWAVFPEDLKVSEKKVFDPQDKNLLYWNKFFEILCIFSVACDPFFFYLPYFNHKSFCLAIDNELASFAVTLRTIFDVFYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIAKRYLRRYFIVDFISVLPVPQIVVWKYLYSNKRAQVLGTKTALLRIVILQYFPRFLRFIPLASEVKKTAGVFSENAFIGAMYYLIWYMLASHITGSVWYLLAIERNDTCWKNACYEVEGCNTHFLYCGSSNKHMSGYESWRNVSETVLKSRCFVREDNSEFNYGIFSQAIQSDIVASIEVFPKFCYCLWWGLQNLSTLGQGLLTSTYPGEVMFSIVIAIMGLLLFSLLIGNMQTYLQSMSVRLEEMRIKRRDSEQWMHHRLLPPELRQRVRRYDQYKWLNTRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEADFCGEELLTWALDPKSAANLPSSTRTVKAINEVEAFALEAEELKFVASQFRHIHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRHYRRKIAEQRRKEEEESYDSDYEGGDDSARALVPHNESSSGFGFGTTVYASRFAANALRGHRLRVGSSSNFMKLRKPSEPDFSVFDKE 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00011 748 SUPERFAMILY Voltage-gated potassium channels 104 433 - -
Gabi792g00011 748 MobiDBLite consensus disorder prediction 669 690 - -
Gabi792g00011 748 FunFam Cyclic nucleotide-gated ion channel 1 438 502 - -
Gabi792g00011 748 SUPERFAMILY cAMP-binding domain-like 441 631 IPR018490 -
Gabi792g00011 748 CDD CAP_ED 511 642 IPR000595 -
Gabi792g00011 748 Gene3D Jelly Rolls 509 629 IPR014710 -
Gabi792g00011 748 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 93 742 - -
Gabi792g00011 748 Gene3D - 114 436 - -
Gabi792g00011 748 ProSiteProfiles IQ motif profile. 647 676 IPR000048 GO:0005515
Gabi792g00011 748 Pfam Ion transport protein 111 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi792g00011 748 FunFam Cyclic nucleotide-gated ion channel 1 509 627 - -
Gabi792g00011 748 ProSiteProfiles cAMP/cGMP binding motif profile. 511 594 IPR000595 -
Gabi792g00011 748 SMART cnmp_10 511 642 IPR000595 -
Gabi792g00011 748 Gene3D Helix hairpin bin 438 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00011 Gabi-Chr792 92828 96698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00011 6 742 Ion Channels AT1G15990 69.571 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00011 K05391 - gmx:100810453 1298.88