Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00008 ATGTCTCTGAAGATAGCAGCTGAAAGATGGCCAAAATCACCATCAGAGAGGGTGGAGGAGCCATTGGTGGTAGTAAAAGAATATGATGAAGAGAGACACAAGGTAGCAATAGAGAAACTGGAGAGGCTTTGTGAAGTTGGACAAAGAGGAAAGCCATCTCTTGTTACTGACCTCATTGGCGACCCCATATGCCGTATCCGTCACTTTCAATTACATGTCATGCTGGTTGCAGAATATGGAGAAGAAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTAAAAACAGTTACAAGAGGGAATTCTGTTTATGTAAAGCTTGCTTATATTTTGGGGCTCAGAGTTTCACCACAACACAGGAGATTTGGCATTGGGACAAAACTAGTTGAACATTTAGAAGAATGGTGCAAGCAAAAGGAGGCTAAGTATGCATATATGGCAACTGATTGTACAAATGAGCCTTCGGTCAATTTGTTCACAAAAAAATGTGGCTACTTAAAATTCAGGACTTTAACCATGCTAGTGCAGCCTGTTCATGCTCACTACAAGCCAATTAGCTCAAGTGTTGCTGTGCTTCACCTTCCACCACGCCTAGCTGGGTCCATGTATAACCATATGTTTGCCAATTCAGAATTTTACCCTAGAGACATAGACTTAATTTTGTCAAACAAGCTAAATTTGGGCACTTTCATGGCCATCCCCAAGAAGTACCTCTCCAAATGTGATCCAAAAAGTGGCATTCTCCCTCCAAGCTTTGCAATATTAAGTGTGTGGAACACCAAAGAAGTGTTCAAATTGCAAGTGAAGGGTGTGTCACCACTTGCACATGCATGCTGCGTAGGTACAAGGTTATTGGATGAATGTATGCCATGGCTAAGGTTACCTTCTTTTCCTGATGTTTTTAGGCCTTTTGGGGTTTATTTTATGTATGGACTACACATGGAGGGTAAGTGTGGATCTCACCTCATGAAGTCCCTATGTGGATTCGTGCATAACATGGCAAGAGATGATGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCATAGGGACCCAGTTAGAGACGCTGTCCCACATTGGACCAAATTCTCATGGGCAGAAGACATGTGGTGCATTAAGAATCTTGAGACCGCGAAGCAGGATATCCCTGATAAATGTGGGCCACCTGATAATTGGTTCACTTCTAGATCCTCTTCGCCAGTTATTTTTGTTGATCCTCGTGATTTTTGA 1227 0.4328 MSLKIAAERWPKSPSERVEEPLVVVKEYDEERHKVAIEKLERLCEVGQRGKPSLVTDLIGDPICRIRHFQLHVMLVAEYGEEGEVVGVIRGCVKTVTRGNSVYVKLAYILGLRVSPQHRRFGIGTKLVEHLEEWCKQKEAKYAYMATDCTNEPSVNLFTKKCGYLKFRTLTMLVQPVHAHYKPISSSVAVLHLPPRLAGSMYNHMFANSEFYPRDIDLILSNKLNLGTFMAIPKKYLSKCDPKSGILPPSFAILSVWNTKEVFKLQVKGVSPLAHACCVGTRLLDECMPWLRLPSFPDVFRPFGVYFMYGLHMEGKCGSHLMKSLCGFVHNMARDDGGCGAIVAELGHRDPVRDAVPHWTKFSWAEDMWCIKNLETAKQDIPDKCGPPDNWFTSRSSSPVIFVDPRDF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00008 408 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Gabi792g00008 408 Gene3D - 23 168 - -
Gabi792g00008 408 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Gabi792g00008 408 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 66 169 IPR016181 -
Gabi792g00008 408 CDD NAT_SF 74 144 - -
Gabi792g00008 408 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 197 IPR000182 GO:0016747
Gabi792g00008 408 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 20 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00008 Gabi-Chr792 75383 77609 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi792g00008 Acetyltransf_1 4.4e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00008 - - gmx:100799977 749.969