Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00003 ATGGATTGTTCAACATGGATTAACACTTCCTTGGATCTTAACATTAATTCCTACAGAGTTCATGAAGAAGTTCTTCAGAAGAAGGAGGTGGAAAGCAAGCTTTTCTCATTGGGGATGACAAAGTTTTCTGTGAAAGAAGAGTCCACTGGTGGTGACTTAGAGAAGGAAGTGAAGAGGGTGACAGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCAGTGATGTGTGAGAATTACAACACATTGCGGAGCCACTTGATGGAATATATGAAGAAAAATCCTGAAAAGGAGCTCAGCACATCATCAAAGAAAAGGAAGTCTGAAAGCAGCAATAACAATAATAGCAACCTGATGGGAATTAACAATGGAAACTCAGAGAGCAGCTCGACTGATGAAGAATCATGCAAGAAACCGAGGGAAGAAACCATCAAAGCAAAAATTTCAAGAGCTTATCTCAGGACTGAAGCATCTGATACAAGCCTTATTGTTAAAGATGGATACCAATGGAGGAAGTATGGACAAAAGGTGACCAGGGATAACCCTTGTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGTTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTCCTGGTTGCAACTTATGAAGGGGAGCACAATCATCCCAACCCTTCTCAAATTGAGGCAACTTCAGGTTCTGGCCGTAGTGTGACCCTTGGGTCAGTACCTTGTTCAGCATCTCTCAGCTCTTCCACACCAACAGTTACCCTTGACATGACAAAATCTAAGTGCAGCAACGATGTCAAGGATACAAAACCAAAAACAGTTTCACCTGATGTACCGCAGGTTTTGGTGGAACAGATGGCTACTTCTTTAACCATGGATCCTAATTTCAGAGCAGCACTTGTTGCCGCCATCTCAGGAAGACTGTCGCACAAGAATTAG 942 0.4268 MDCSTWINTSLDLNINSYRVHEEVLQKKEVESKLFSLGMTKFSVKEESTGGDLEKEVKRVTAENKKLAEMLSVMCENYNTLRSHLMEYMKKNPEKELSTSSKKRKSESSNNNNSNLMGINNGNSESSSTDEESCKKPREETIKAKISRAYLRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPNPSQIEATSGSGRSVTLGSVPCSASLSSSTPTVTLDMTKSKCSNDVKDTKPKTVSPDVPQVLVEQMATSLTMDPNFRAALVAAISGRLSHKN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00003 313 MobiDBLite consensus disorder prediction 104 128 - -
Gabi792g00003 313 ProSiteProfiles WRKY domain profile. 157 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi792g00003 313 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 42 309 IPR044810 GO:0003700
Gabi792g00003 313 SUPERFAMILY WRKY DNA-binding domain 159 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi792g00003 313 SMART WRKY_cls 162 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi792g00003 313 MobiDBLite consensus disorder prediction 92 139 - -
Gabi792g00003 313 Pfam WRKY DNA -binding domain 163 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi792g00003 313 Gene3D WRKY domain 146 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi792g00003 313 FunFam WRKY transcription factor 40 147 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00003 Gabi-Chr792 26616 28215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00003 35 313 WRKY Transcription Factor Family AT1G80840 56.507 1.09e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi792g00003 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00003 - - gmx:100807966 480.715