Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00002 ATGGATTGTTCAACATGGATTAACACTTCCTTGGATCTTAACATTAATTCCTACAGAGTTCATGAAGAAGTTCCTAAGGAGGTGGAAAGCAAGCTTTTCTCATTGGGGATGACAAAGTTTTCTGTGAAAGAAGAGTCCACTGGTGGTGACTTAGAGAAGGAAGTGAAGAGGGTGACAGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCAGTGATGTGTGAGAATTACAACACATTGCGGAGCCACTTGATGGAATATATGAAGAAAAATCCTGAAAAGGAGCTCAGCACATCATCAAAGAAAAGGAAGTCTGAAAGCAGCAATAACAATAATAGCAACCTGATGGGAATTAACAATGGAAACTCAGAGAGCAGCTCGACTGATGAAGAATCATGCAAGAAACCGAGGGAAGAAACCATCAAAGCAAAAATTTCAAGAGCTTATCTCAGGACTGAAGCATCTGATACAAGCCTTATTGTTAAAGATGGATACCAATGGAGGAAGTATGGACAAAAGGTGACCAGGGATAACCCTTGTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGTTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTCCTGGTTGCAACTTATGAAGGGGAGCACAATCATCCCAACCCTTCTCAAATTGAGGCAACTTCAGGTTCTGGCCGTAGTGTGACCCTTGGGTCAGTACCTTGTTCAGCATCTCTCAGCTCTTCCACACCAACAGTTACCCTTGACATGACAAAATCTAAGTGCAGCAACGATGTCAAGGATACAAAACCAAAAACAGTTTCACCTGATGTACCGCAGGTTTTGGTGGAACAGATGGCTACTTCTTTAACCATGGATCCTAATTTCAGAGCAGCACTTGTTGCCGCCATCTCAGGAAGACTGTCGCACAAGAATTAG 936 0.4274 MDCSTWINTSLDLNINSYRVHEEVPKEVESKLFSLGMTKFSVKEESTGGDLEKEVKRVTAENKKLAEMLSVMCENYNTLRSHLMEYMKKNPEKELSTSSKKRKSESSNNNNSNLMGINNGNSESSSTDEESCKKPREETIKAKISRAYLRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPNPSQIEATSGSGRSVTLGSVPCSASLSSSTPTVTLDMTKSKCSNDVKDTKPKTVSPDVPQVLVEQMATSLTMDPNFRAALVAAISGRLSHKN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00002 311 MobiDBLite consensus disorder prediction 102 126 - -
Gabi792g00002 311 Gene3D WRKY domain 144 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi792g00002 311 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 43 307 IPR044810 GO:0003700
Gabi792g00002 311 ProSiteProfiles WRKY domain profile. 155 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi792g00002 311 FunFam WRKY transcription factor 40 145 222 - -
Gabi792g00002 311 SUPERFAMILY WRKY DNA-binding domain 157 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi792g00002 311 MobiDBLite consensus disorder prediction 90 137 - -
Gabi792g00002 311 SMART WRKY_cls 160 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi792g00002 311 Pfam WRKY DNA -binding domain 161 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00002 Gabi-Chr792 26616 28215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00002 4 311 WRKY Transcription Factor Family AT1G80840 53.583 1.17e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi792g00002 WRKY 3.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00002 - - gmx:100807966 488.804