Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi792g00001 ATGGATTGTTCAACATGGATTAACACTTCCTTGGATCTTAACATTAATTCCTACAGAGTTCATGAAGAAGTTCCTAAGAAGGAGGTGGAAAGCAAGCTTTTCTCATTGGGGATGACAAAGTTTTCTGTGAAAGAAGAGTCCACTGGTGGTGACTTAGAGAAGGAAGTGAAGAGGGTGACAGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCAGTGATGTGTGAGAATTACAACACATTGCGGAGCCACTTGATGGAATATATGAAGAAAAATCCTGAAAAGGAGCTCAGCACATCATCAAAGAAAAGGAAGTCTGAAAGCAGCAATAACAATAATAGCAACCTGATGGGAATTAACAATGGAAACTCAGAGAGCAGCTCGACTGATGAAGAATCATGCAAGAAACCGAGGGAAGAAACCATCAAAGCAAAAATTTCAAGAGCTTATCTCAGGACTGAAGCATCTGATACAAGCCTTATTGTTAAAGATGGATACCAATGGAGGAAGTATGGACAAAAGGTGACCAGGGATAACCCTTGTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGTTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTCCTGGTTGCAACTTATGAAGGGGAGCACAATCATCCCAACCCTTCTCAAATTGAGGCAACTTCAGGTTCTGGCCGTAGTGTGACCCTTGGGTCAGTACCTTGTTCAGCATCTCTCAGCTCTTCCACACCAACAGTTACCCTTGACATGACAAAATCTAAGTGCAGCAACGATGTCAAGGATACAAAACCAAAAACAGTTTCACCTGATGTACCGCAGGTTTTGGTGGAACAGATGGCTACTTCTTTAACCATGGATCCTAATTTCAGAGCAGCACTTGTTGCCGCCATCTCAGGAAGACTGTCGCACAAGAATTAG 939 0.4271 MDCSTWINTSLDLNINSYRVHEEVPKKEVESKLFSLGMTKFSVKEESTGGDLEKEVKRVTAENKKLAEMLSVMCENYNTLRSHLMEYMKKNPEKELSTSSKKRKSESSNNNNSNLMGINNGNSESSSTDEESCKKPREETIKAKISRAYLRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPNPSQIEATSGSGRSVTLGSVPCSASLSSSTPTVTLDMTKSKCSNDVKDTKPKTVSPDVPQVLVEQMATSLTMDPNFRAALVAAISGRLSHKN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi792g00001 312 MobiDBLite consensus disorder prediction 91 138 - -
Gabi792g00001 312 Gene3D WRKY domain 145 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi792g00001 312 SUPERFAMILY WRKY DNA-binding domain 158 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi792g00001 312 MobiDBLite consensus disorder prediction 103 127 - -
Gabi792g00001 312 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 42 308 IPR044810 GO:0003700
Gabi792g00001 312 FunFam WRKY transcription factor 40 146 223 - -
Gabi792g00001 312 ProSiteProfiles WRKY domain profile. 156 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi792g00001 312 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi792g00001 312 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi792g00001 Gabi-Chr792 26616 28215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi792g00001 4 312 WRKY Transcription Factor Family AT1G80840 53.416 1.21e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi792g00001 WRKY 3.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi792g00001 - - gmx:100807966 484.182