Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi791g00004 ATGGATCTTGGGGTGGTGGGTTTGGATGGGTTGGTGGGTTCAAACACTGGGTTTGTTTCTCTAGCTTCAGATCCTGAACCAAAGCATAAGTGGTATGGATCTGGGTTCAATAAGCAAGAAAGATCTGGGACCACTGAAGATGAATGGAGAAGCTCCAAACTTGCTAAGACTGATGATATATCTGCCTCTAAAGCAATGTTGCTTCAGCAGAGGAACTCTTTGCTGAGATCTAATGCCACTTTGTTTTCTGATGGACAGCACCAAAACCAAATGCTTAGTTTCTCTTCTCCAAAATCAGAGCCTTTGTTGGTAGACAAGGCCACCCCAAATGCTACATTACCTTATTCTTACCACCCATTCTCTAGTTACAGCAGAAATACAGGTTACAGTTCAGGAATCATGCATGGGGTTAATACTGGTGCCAGAGGGCCATTCACTCCGTCTCAGTGGATGGAGTTGGAACACCAGGCCTTGATCTACAAGTACATATCAGCAAATGTGCCTGTACCTTCTCATCTTCTCATCCCAATCAGAAAAGCGCTTGATTCTGCTGGCTTCTGCAACTTCTCAACCGGACTCCTTAGACCCAATGCATTGGGGTGGGGAGGTTTCCATCTGGGATACTCGAACAACACTGATCCTGAGCCAGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCAAGAGATGCCGTTGTGGATCAGAAGTATTGCGAGCGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTTACTGGGACCACCACCACCACCACTACTATTACGCCAAATAGTTCAAAGCTCATCCCTAACAACAATGCTTCCTCATCCTCACTGTCTATTGTGGTGCCCGGTAACAGTGCATCCAACAGCCTTACCTTTGCACACCAAGAACCTAAGAATATGCACCAGCCTCTTGCATCTGATGCTTCTGTCGCCAACACCATCAACAGGATGTTTATGAATAACAAAGAGAGCAACGCGAGTGAGAGAATGCAGGATGGGCCTGCACTTCCAATGCTGCCTCCAACCCTTGAGCTGAAACCAAAGGAAAACCACTTTATGATTGAGAAACAGCAATTCCCATATGAAGAGTCCTCAAAGAGTAACGAGTTTGGGTTTGTCACTTCTGATTCCTTGCTTAACCCTTCTCAGAAAAGCTCCACCTTGCTCACTAGCAGAAGCTTTGGTTCTTCACAAAACCCCATTAACCGAGACACAGAGTCCCAACATTCCCTACATTCCCTTAGGCATTTCATTGATGACTGTCCCAAAACACAGTCTAATAATCATCATCATCGCTCTGGTGGTGTTTCATGGCCTGAACTTGACATGCAGTCAGATAGGACACAGCTTTCAATTTCCATCCCAATGAGTTCCTCGGACTTCATGTCATTCACTTCCTCACCCACCAATGAAAAGCTCACATTGTCACCTCTTAGGCTATCAAGAGAATTAGACCCAATTCAAATGGGTTTGGGTGTGGGTGTGGGAAGTGGTCTCAATGAATCAAACACTAGGCAAGCTAATTGGATTCCAATTACTTGGGAGAGTTCTATGGGTGGTCCTCTTGGAGAGGTTCTGCATCTTAGTAATAACAACAACAATGCAAGTGATCAATGTGTTAAGAACTCCTCTGCTCTCAACCTTATGACTGATGGGTGGGACAATAGTCCTCCATTAGGGTCATCACCAACTGGGGTATTGCAAAAAACAGCATTTGGATCACTTTCACATAGCAGTGCTGGGAGCAGTCCAAGGGCAGAGAACAAGACTCAAGAAGGGGCCAGCTTCTGCAATGACCTTCTCGGTTCAACTCTTGGGAATGCTTCTTCCTCTTTACCATAG 1884 0.4602 MDLGVVGLDGLVGSNTGFVSLASDPEPKHKWYGSGFNKQERSGTTEDEWRSSKLAKTDDISASKAMLLQQRNSLLRSNATLFSDGQHQNQMLSFSSPKSEPLLVDKATPNATLPYSYHPFSSYSRNTGYSSGIMHGVNTGARGPFTPSQWMELEHQALIYKYISANVPVPSHLLIPIRKALDSAGFCNFSTGLLRPNALGWGGFHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTGTTTTTTTITPNSSKLIPNNNASSSSLSIVVPGNSASNSLTFAHQEPKNMHQPLASDASVANTINRMFMNNKESNASERMQDGPALPMLPPTLELKPKENHFMIEKQQFPYEESSKSNEFGFVTSDSLLNPSQKSSTLLTSRSFGSSQNPINRDTESQHSLHSLRHFIDDCPKTQSNNHHHRSGGVSWPELDMQSDRTQLSISIPMSSSDFMSFTSSPTNEKLTLSPLRLSRELDPIQMGLGVGVGSGLNESNTRQANWIPITWESSMGGPLGEVLHLSNNNNNASDQCVKNSSALNLMTDGWDNSPPLGSSPTGVLQKTAFGSLSHSSAGSSPRAENKTQEGASFCNDLLGSTLGNASSSLP 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi791g00004 627 MobiDBLite consensus disorder prediction 260 292 - -
Gabi791g00004 627 MobiDBLite consensus disorder prediction 395 421 - -
Gabi791g00004 627 SMART QLQ_2 143 179 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi791g00004 627 Pfam WRC 214 256 IPR014977 -
Gabi791g00004 627 MobiDBLite consensus disorder prediction 31 50 - -
Gabi791g00004 627 MobiDBLite consensus disorder prediction 246 292 - -
Gabi791g00004 627 PANTHER GROWTH-REGULATING FACTOR 5 87 480 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gabi791g00004 627 Pfam QLQ 144 178 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi791g00004 627 MobiDBLite consensus disorder prediction 565 611 - -
Gabi791g00004 627 ProSiteProfiles WRC domain profile. 213 257 IPR014977 -
Gabi791g00004 627 ProSiteProfiles QLQ domain profile. 144 179 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi791g00004 Gabi-Chr791 113896 117760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi791g00004 27 587 GRF Transcription Factor Family AT2G22840 42.096 2.21e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gabi791g00004 WRC 5.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi791g00004 - - aprc:113865097 878.241