Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi791g00002 ATGAAGTCCATGAATGATAGCAACACTGATGATGAGAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGATGTCACTTCTGGTCCTCTCCATCATCATCATAACTACTATCATCAGCCCCATCCTTCTACAGCTTCAAACTCCGTTCCCACAAGCTTCTATCTGTCACCTTCACACCTCAACACCTCTGAAATCTGTTATGGTGTTGGGGAAAACAGTACCTTTCATTCATCTTTGGCTATGATGCCACTCAAGTCTGATGGTTCACTTTGTATAATGGAAGCTCTCAGCAGATCACAAACCCAAGTGATGATGCCTACTTCGTCTCCAAAACTAGAGGACTTTCTTGGTGGTGCAACAATGGGAACTCAAGAATATGGAGGCCATGAAAGAGAAGCAATGGCTCTTAGCCTAGACAGCATCTACTATAACCAAAATGCTGAACCTCAAACCAACCGAGACCATTCTTCATTGGACCTTCTTTCTGACCCTTTTAGACAACAACAACAAGGCCATGTCACGGTCCAATCCCATCCATATTATTCAGCACTTCCTTGCCATGGGATTTATCAAGCACCATTGGAGGAAGAAAATAAGGAACCCCACGACACAGTTTGCAGCTCCCAAATGCCTCAAGTGGCAGAGGTAAACACTGCTTGCTTCAAAAACTTGATGGCCCCAAGAGATTATTCTTCAACTCATGAGACTCTTGAGCAGCATCAAGTGAATACTAGTGCTTCTGTGCCTGTCGGTGTTAGCACAGTAGGTGTTGGAGATTTGCAATCGTTAAGCTTGTCCATGAGCCCTGGTTCTCAATCAAGCTGTGTCACGGTTCCAAGGCAGATCTCACCTTCAGGAACTGATTCTGTGACCATGGAAGGCAAAAAGAGAGGTGCTGCTAAGCTTGGCCAGAAGCAAACTGTGCATAGGAAATCCATTGACACATTCGGACAGAGAACTTCACAGTATAGAGGCGTGACAAGGCATAGATGGACTGGTAGATATGAAGCGCATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAAACCAGGAAAGGACGACAAGTTTATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCGTATGATCTTGCGGCTCTCAAGTATTGGGGATCTTCAACGCATATAAACTCCCCGGTAGAAAATTACCAAACTGAACTTGAAGAAATGAAAAGCATGAGCAGGCAGGAATATGTGGCTCACTTGAGAAGAAAGAGCAGTGGGTTTTCAAGAGGTGCCTCAATGTACAGAGGGGTGACCAGGCACCACCAACATGGCAGATGGCAAGCAAGGATAGGCAGAGTTGCTGGAAACAAGGATCTTTATCTTGGGACATTCAGTACTCAAGAGGAAGCAGCTGAAGCATATGACATAGCAGCAATCAAATTTCGAGGGGTGAATGCTGTCACTAACTTTGACATGTCTAGATATGATGTTGAAAGAATCATGGCCAGCAATACCTTACTTGCTGGAGAGCTAGCTAGAAGAAACAATAATAAGGAAAGTAAACCAAGAACTGTGGAGGCCATAGATTATAATAATATTGTAAACAGGGAAGAAGTTGAAGCTGTAAACAACAATAATGAAAATGGTTCAACAGACTATACGATGGCTTTGTATCAGTCTCAGCAGCAGCAACAGTCAAATAGCTACGACGACCAAAAAACAATAAAGTGTGGAAATTATAGAAACTCTGGTTTCTCTATGGCCCTACAAGATCTTGTTGGGATTGATTCAGTAGGATCTAGCCAGACAATGCTAGATAATGACACTGTCAAGATAGGGACTCATTTTTCAAACCCGTCCTCGCTGGTGACCAGTTTAAGCAGCTCCAGAGAATGCAGCCCTGATAAAACGGGTCCCACACTGCTCTTTCCAATGGGATCAAAGATCGTTAGCCCCATTTCTACCAGTGTTACCTCTTGGTTTCCCTCAGAAGCAACTCAACTGAGGCCAGCTACTACTACTATATCAATGTCACACTTGCCACTTTTTGCGGCTTGGAACGATACCTAG 2058 0.4397 MKSMNDSNTDDENNHNWLGFSLSPHMKMDVTSGPLHHHHNYYHQPHPSTASNSVPTSFYLSPSHLNTSEICYGVGENSTFHSSLAMMPLKSDGSLCIMEALSRSQTQVMMPTSSPKLEDFLGGATMGTQEYGGHEREAMALSLDSIYYNQNAEPQTNRDHSSLDLLSDPFRQQQQGHVTVQSHPYYSALPCHGIYQAPLEEENKEPHDTVCSSQMPQVAEVNTACFKNLMAPRDYSSTHETLEQHQVNTSASVPVGVSTVGVGDLQSLSLSMSPGSQSSCVTVPRQISPSGTDSVTMEGKKRGAAKLGQKQTVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGSSTHINSPVENYQTELEEMKSMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDMSRYDVERIMASNTLLAGELARRNNNKESKPRTVEAIDYNNIVNREEVEAVNNNNENGSTDYTMALYQSQQQQQSNSYDDQKTIKCGNYRNSGFSMALQDLVGIDSVGSSQTMLDNDTVKIGTHFSNPSSLVTSLSSSRECSPDKTGPTLLFPMGSKIVSPISTSVTSWFPSEATQLRPATTTISMSHLPLFAAWNDT 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi791g00002 685 FunFam AP2-like ethylene-responsive transcription factor 428 489 - -
Gabi791g00002 685 SUPERFAMILY DNA-binding domain 326 393 IPR016177 GO:0003677
Gabi791g00002 685 CDD AP2 428 489 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 SUPERFAMILY DNA-binding domain 428 489 IPR016177 GO:0003677
Gabi791g00002 685 FunFam AP2-like ethylene-responsive transcription factor ANT 326 395 - -
Gabi791g00002 685 Pfam AP2 domain 430 479 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 Pfam AP2 domain 327 385 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 Gene3D AP2/ERF domain 326 395 IPR036955 GO:0003700|GO:0006355
Gabi791g00002 685 Gene3D AP2/ERF domain 429 489 IPR036955 GO:0003700|GO:0006355
Gabi791g00002 685 ProSiteProfiles AP2/ERF domain profile. 327 393 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 107 557 - -
Gabi791g00002 685 ProSiteProfiles AP2/ERF domain profile. 429 487 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 MobiDBLite consensus disorder prediction 273 297 - -
Gabi791g00002 685 PRINTS Ethylene responsive element binding protein signature 328 339 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 PRINTS Ethylene responsive element binding protein signature 469 489 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 MobiDBLite consensus disorder prediction 273 295 - -
Gabi791g00002 685 SMART rav1_2 327 399 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 SMART rav1_2 429 493 IPR001471 GO:0003700|GO:0006355
Gabi791g00002 685 CDD AP2 326 394 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi791g00002 Gabi-Chr791 12633 15835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi791g00002 410 685 AP2-EREBP Transcription Factor Family AT4G37750 24.104 1.23e-11 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gabi791g00002 AP2 2.8e-13 CL0081