Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi790g00010 ATGGCTCCTATTTCGTGTTCAAGGAAAGAGTTCAAACCCACCGATGATGAACTCATCCAGTTGTTTCTTTACAATAAGGTCAACGGGAAACCATTGCCTAAAGATGTTACGATTCTTGAATATGACTTATATGGTGAAAAGAACCCTTGGAAGATTTGGGAAGACTTCGAAGGTTCTAACTCTTGCGGTGGAACGGGCCTTTACTTCTTCACCACCTTAAAGAAAAAGTTCTTCACTGGCACACGCTCGGTTCGCACCATTGGGTGCGGGTCTTGGGAAGCAAAAGACAAGGGGAAAAAATGTATGGCCAATGGCACGATTCAATGTATTGGGATAAAGAGACGTTTACGATTAGAGAAGAGTGGCACCAACCATGATGGTGCTTGGATCTTGCATGAATATAGAATTTATTCTTCGTTGTTAGACAATGCATCTGCCGACAACTATGTTCTCTGCAGATTTAGAAAGAATTTAATACATGATCTTCACAAAAAACTAGGTGTGAAGAGAAGTAGACAAGAAGACTTCACCATGAAGCAACCGAGAAAGACCGTTGTTCTTTGA 564 0.4131 MAPISCSRKEFKPTDDELIQLFLYNKVNGKPLPKDVTILEYDLYGEKNPWKIWEDFEGSNSCGGTGLYFFTTLKKKFFTGTRSVRTIGCGSWEAKDKGKKCMANGTIQCIGIKRRLRLEKSGTNHDGAWILHEYRIYSSLLDNASADNYVLCRFRKNLIHDLHKKLGVKRSRQEDFTMKQPRKTVVL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi790g00010 187 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
Gabi790g00010 187 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
Gabi790g00010 187 PANTHER NAC TRANSCRIPTION FACTOR 56 10 157 - -
Gabi790g00010 187 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Gabi790g00010 187 SUPERFAMILY NAC domain 11 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi790g00010 Gabi-Chr790 127675 128371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi790g00010 11 154 NAC Transcription Factor Family AT5G13180 34.694 6.71e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi790g00010 NAM 7.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi790g00010 - - vvo:131598608 193.741