Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi78g00006 ATGGAAGATCAAAGCCAGAAAAAACCCAGAATCCTCTGCCTCCATGGACACGGGAGCAATGCTGAAATCCTCAAGCAATACGTAGTCTTGCGTTGGCCAGAAACTGTAATACAAAAGCTGGACCTTGTCTTCCTCAACGGAAAATTTTCAGCACAGGGAAAATCAGACGTTGAAGGCCATGAATGGTTCCACGCTAATGAGGATTTCACAGAGTATACGAACTTCGAAGAATGTGTAGCATACATTGAAGATTACATGGTGAAAAATGGTCCTTTTGATGGTTTACTTGGATTCTCTCAGGGAGCAATTTTAGTTGCTGCAATGCCAGGAATGCAAACACAGGGCGTAGCACTTGGGAAGGTAAACAAGATCAAGTTCCTGATTGTGATATCAGGAGCCAAGTTTGGTGGAAAGAAGTTTGGAATGCCTGAACTGGCTTCCAATACATTTTCAGAACCAATCGGTTGCCCTTCTCTTCATTTTATAGTGAACAAATTATAA 501 0.4212 MEDQSQKKPRILCLHGHGSNAEILKQYVVLRWPETVIQKLDLVFLNGKFSAQGKSDVEGHEWFHANEDFTEYTNFEECVAYIEDYMVKNGPFDGLLGFSQGAILVAAMPGMQTQGVALGKVNKIKFLIVISGAKFGGKKFGMPELASNTFSEPIGCPSLHFIVNKL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi78g00006 166 Gene3D alpha/beta hydrolase 5 165 IPR029058 -
Gabi78g00006 166 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 163 - -
Gabi78g00006 166 SUPERFAMILY alpha/beta-Hydrolases 3 132 IPR029058 -
Gabi78g00006 166 Pfam Serine hydrolase (FSH1) 7 162 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi78g00006 Gabi-Chr78 93214 94847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi78g00006 3 160 Sulfurtransferasese or Rhodanese AT1G09280 30.366 9.82e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi78g00006 - - gmx:100794918 250.751