Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi782g00001 ATGTTTTCATTGATAAAGTACACGTCAGATGAATGGATGGATTTCTATACATTTAACAAAGCCTCAGATATCTTATTTGGTTTGCTTGACATAAGTTTATTTTATTTAAATTACACGCACTTTTCCTATATTGCCATTTACTGGGGTCAAAATGATGATGAGGGTAGCCTAACAGAAACATGTGCAACGGGAAAGTACTCCTATGTAATCATAGCCTTCCTGAACAAATTTGGGAATGGCACAACCCCTGAAATAAACCTGGCAAGTCATTGTGACCCTTCTTCCAATGGTTGCTCCACGTTAAGCACAGACATAAGGAACTGCCAAATGCTAGGGATCAAAGTCTTGCTCTCCATTGGAGGAGCAGATGGGGATTACGGTCTAGCTTCCTCTGATGATGCTAAAAATGTTTCTGATTACTTGTGGAACAATTTCTTGGGTGGAAGCTCATCTTCACGCCCACTTGGGAAAGCTATATTAGATGGCATTGATTTTGACATTGAGATTTCCACACCACAACACTGGCAGGAACTTGCAGGTTACCTCAAGTCACACAGCACCCCAACACAAATCGTTTACTTAAGTGCAGCACCTCAGTGCCCATTTCCTGATAGTGAACTTGGCGTTGCCCTTGACACACAGATTTTTGACTATGTTTGGATACAGTTCTACAACAATCCTGAATGTGAATATAACCAAAGTAATGTCAATAATTTGTTGAATTCATGGAATCAATGGACGACATCATTGAAAAAAGGAAAAGTCTTTTTGGGGTTGCCGGCATCTCCAGCAGCAGCAGATAGCGGTTATGTTCCAGCTGATTTGTTGATATCTGACATTCTTCCTGTCATAAAGAAGTCATCTAACTATGGAGGTGTAATGCTGTGGACAACATACTATGATAAACAAAGTGGATACAGCTCCTACATCCAAAGTTCTCTTTGCACACAACAAAATCCTCATGACTGCGGAGGAAATGACAGCCATAAAGCAAACAAGTGGTGGAAATGGCTTATCATTGGGGTGGGAGCAGCCCTTGCAATATCTCTCATCTTCTGCTTTTGCTGTACCGTACGGAGAAAAGACACTCCTGAAGTGGATGGAAAAATGAAGCAAAAGAAGCCGTTACATGTAATTGAAGGCAATGCAGTGCTTTATGACAAAGCAAAAAATATTGAAGTAGGGGGAAGGACTAGTACTGATGTCAAAATATTCAGTTTTGAAAGCATTAATGCTGCCACAAACAATTTCTCAGCTACTAATGAACTGGGAGAGTGGGATTTTGGTCGTGTTTATAAGGGAACATTACTAGATGGGCAAGAAATAGCAGTAAGGAGACTTTCTACAATTTCAAAAGAAGGGCTGATAGAGTTCAAGAATGCAGTTATGCCCTTGGCCAAACTCCAGCACAATAATCTTGTAAGGCTTTTAGGGTTCTGCTTCCAGAGAGAGGAAAGAATAATAGTGTACGAGTACATCTCCAAAAAATGTTTGGACTTCTACTTGTTTGATGCAAATAGAAAGAATGTGCTAGATTGGAGAAAACGAGCTAACATCATTGAAGGCATTGCTCAAGGGCTTTTTTATCTTCACCATAATTCAAGACTACAAGTGATACAATTGAACTTAAAGGCAAGCAATATATTGCTTGATGAAGAAATGAATCCTAAAATATTTGATTTTGGCATGGCTCAAATGTTTGGTTTAAAACGTCATGAAGAAGATACAAATAGAATTTCTGGCAGATATGGGAGCATGACATCAGAATATGCAATCAACGGTATATGGTCTACTAAAACAGATGTTTTCAGTTTTGGCATTCTGATATTGGAGATTCTTAGTGGCAAGAAGAGTAGTAGTCATTATCATTCTGCAGAACCACCAAATCTAATAGAATATGCGTGGCAGCTATGGAATTCAGGTCGAGCTCTAGAGCTAATAGACTCAGAACTAAATGAATCAAGCACTACAAATGAAGTACTGCGATATATTCATATTGGCCTCTTGTGCGTACAAGGTGATGCAGCAGACATACCTAGCATGTCAAATGTTGTTTCTTTTCTCTCAAATGATACAATTGAACTTGCTCAGCCAAAGCAGCCAGCATTCTTTACCAATGTGGTTGAAGAAGATTCAGCTGCCTAA 2145 0.393 MFSLIKYTSDEWMDFYTFNKASDILFGLLDISLFYLNYTHFSYIAIYWGQNDDEGSLTETCATGKYSYVIIAFLNKFGNGTTPEINLASHCDPSSNGCSTLSTDIRNCQMLGIKVLLSIGGADGDYGLASSDDAKNVSDYLWNNFLGGSSSSRPLGKAILDGIDFDIEISTPQHWQELAGYLKSHSTPTQIVYLSAAPQCPFPDSELGVALDTQIFDYVWIQFYNNPECEYNQSNVNNLLNSWNQWTTSLKKGKVFLGLPASPAAADSGYVPADLLISDILPVIKKSSNYGGVMLWTTYYDKQSGYSSYIQSSLCTQQNPHDCGGNDSHKANKWWKWLIIGVGAALAISLIFCFCCTVRRKDTPEVDGKMKQKKPLHVIEGNAVLYDKAKNIEVGGRTSTDVKIFSFESINAATNNFSATNELGEWDFGRVYKGTLLDGQEIAVRRLSTISKEGLIEFKNAVMPLAKLQHNNLVRLLGFCFQREERIIVYEYISKKCLDFYLFDANRKNVLDWRKRANIIEGIAQGLFYLHHNSRLQVIQLNLKASNILLDEEMNPKIFDFGMAQMFGLKRHEEDTNRISGRYGSMTSEYAINGIWSTKTDVFSFGILILEILSGKKSSSHYHSAEPPNLIEYAWQLWNSGRALELIDSELNESSTTNEVLRYIHIGLLCVQGDAADIPSMSNVVSFLSNDTIELAQPKQPAFFTNVVEEDSAA 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi782g00001 714 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 251 707 - -
Gabi782g00001 714 Pfam Protein tyrosine and serine/threonine kinase 420 627 IPR001245 GO:0004672|GO:0006468
Gabi782g00001 714 SUPERFAMILY (Trans)glycosidases 41 310 IPR017853 -
Gabi782g00001 714 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 42 317 IPR001223 GO:0005975
Gabi782g00001 714 FunFam Putative LRR receptor-like serine/threonine-protein kinase 387 492 - -
Gabi782g00001 714 SUPERFAMILY Protein kinase-like (PK-like) 398 688 IPR011009 -
Gabi782g00001 714 Gene3D Glycosidases 43 314 - -
Gabi782g00001 714 Gene3D Phosphorylase Kinase; domain 1 382 492 - -
Gabi782g00001 714 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 493 696 - -
Gabi782g00001 714 Gene3D Transferase(Phosphotransferase) domain 1 494 702 - -
Gabi782g00001 714 ProSiteProfiles Protein kinase domain profile. 417 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi782g00001 714 CDD GH18_hevamine_XipI_class_III 44 310 IPR045321 -
Gabi782g00001 714 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 160 168 IPR001579 GO:0004553|GO:0005975
Gabi782g00001 714 Pfam Glycosyl hydrolases family 18 44 301 IPR001223 GO:0005975
Gabi782g00001 714 FunFam Acidic endochitinase SE2 42 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi782g00001 Gabi-Chr782 7399 11526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi782g00001 44 314 Glycoside Hydrolase AT5G24090 60.148 1.29e-122 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi782g00001 PK_Tyr_Ser-Thr 1.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi782g00001 - - nau:109210302 728.783