Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi779g00013 ATGCAGCAGCATGAAGATGATGAGATGAAGGGGGAGAAGATAACGTTGACTGAACACAGAAGGGACACTTCCAATTTATTGGAACTTTCGTACTCCAGTCACGTAGAACATGGTTGGTCAAAGAAGAATAGTTACTCAAATGTGGCTTCAGTGAAAAAACTGAACAATGAGGAGTTATCCAAACAATCAGGCACCAGAAATAATGTACCAAGCCTTGTGGCAAGGTTGATGGGGATAGACATGATGCCATTAGACACTAAATCTGTTGTAACATTAAATGAAAGCACAAGTGAAAACTTGGAGAGGAAGTTATCAAAGAAGGGAATGAATGAAAGGGGTACGGTTACGGGTTCTTCCAACTTTAATTCTTCTAGCCAGAAGGAATTTGATTCATTTCATCAGGACATTGATGATGATGGATGGGAACAAAATTTTGGAAAACCAAGGCCAAAGGAACATCCTCAGGAAGAGGAACTCCAGAAATTCAAGAAAGAATTTGAGGCATATCAAGCCACAATGTTTAAGGAGTGTTCTAAGGTTGTTGAAATTGAAAGTGTTTCTAGGAGAATGCTTGCTCAAGAGAACCGGAACAAGGGAAAGGTGCCCAATAATGCAAGTTCACAAAGAGAGGCAGCAGAGAAATCTGCAGAACTTGATAGCCACTCATTTAAACCAAAGCTACCTAATGATGTTGTGAATCTTGTGATGGAGCCAATCTCAACTAAGCAAAGAGAATCCTTTCCTTCAAGGAGAAGAACACTAAGTAGAGACTTTAAGGAGTCTTCAATGATGAAATCCAGAAGAAGATTAGATATATGTTCTTCTTCCACTCAGATAGTTATCTTGAAGCCTGGTCCTGATAGGATTTGCAATTGCAACCTTAAAGAGGATTGGATTAGTTCAACAGGCACTTTACAAGGGAGAAATAGTATAGGAGATTTTCTTGAGGAGGTGGGAGAGCGGTTGAAACGGGAACTACAAGGGAAAACTCTCAAAAAGGGTTCTGTGGTTCAAGCAAGTGGAATTGAGACACTTCACAATGAAAAACCATCTGATCCTACAGGAATAGCTCATCATATAGCAAAAGAGGTAATAGATGCTGAAGGAAATTTACTCCGCTCGGAATCAACAAGATCACACAACAGTGAAATTCAGTTCTATGGATCAAGCTCCCCACAATTTTTCAATAGAGAAACCAGGAGATTCTTGTCAGAGAGGCTAAGAAATATTAAGAAAAGTGAAGCACATTTTGACATACCAGAAGCGACTTGTGGGAACTCAAGGCCATATATGATAGACAATAATAGAGTTAGACTAAAGCAAGAAGAGGATACTACAAATTGTGCAAATGACATGAGCCACTGGGAAATTTTGAAAGTGAAAAAAGAAATACAAACAGGTTCCTTCAGACACGAACCAGATGACAATGTATTACTCCACAAGGAGTTGTCCCCTAGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAGGAACATCATTTGGTAATCTTCTTCTAGAGGACAGCCACATTTTAACGGGTGTCCGAATTCAGAGGAAGCTTGAAGCTGTTGAAACAATGCCTGTCAATGAGAACTTCACTGAGGTACCTCCTAGTCCTGTATCTGTGTGCACCTGTGCTCAGGAAAGTCCAATATCAACTCCAGATGTATCTTCAACAGAGGGTATTGCTATGCCCAAGGTTTTTAGAGATATCAGCTCTGGTTTGAATGAGCTAAGGAGGCAACTCAGTCAACTTGACTCTGATTGCCCTGAGGATTTGACAACGAAGCAAGAGCCTGTTGAGTCTGAATTAGTTCAAATGGAGGATCCAGCAGAATCTTACATAAGAGATCTGCTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTTTACTAATAGGGGACACACTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTAGAAGAATCCCATAAGGAATTGGTCAAGGAGAATGAAAGATCTATAAAGGATCCTTATGAGAATAAATTGGAGCACAAGATTTTACTTGATTTGTTAAATGAGGCACTTTCCATTGTTCTTGGACCACCTTTGACATTCTCTGCATTCAGAAATAAACTAAGCAACTCCTCCATGCAGCCTCCACCATGTGGAAAGGAACTACTGAAGTTAGTTTGGGACATTATCCATGTTTCTTTATATCCTCCATCTAACACAACTCCTTATTCACTTGATAGTTTGGTGGCACAAGATTTGGGATCCATGTCCTGGTCTGGACCAATAAATGATCAGATCAATATATTGCAAAGAGAGATAGCATATTTGATCATTGGTGATTTGGTTGAAGAAGTCGCGAAGGATATGCTCTTAGGTGTAGTGTGA 2376 0.3998 MQQHEDDEMKGEKITLTEHRRDTSNLLELSYSSHVEHGWSKKNSYSNVASVKKLNNEELSKQSGTRNNVPSLVARLMGIDMMPLDTKSVVTLNESTSENLERKLSKKGMNERGTVTGSSNFNSSSQKEFDSFHQDIDDDGWEQNFGKPRPKEHPQEEELQKFKKEFEAYQATMFKECSKVVEIESVSRRMLAQENRNKGKVPNNASSQREAAEKSAELDSHSFKPKLPNDVVNLVMEPISTKQRESFPSRRRTLSRDFKESSMMKSRRRLDICSSSTQIVILKPGPDRICNCNLKEDWISSTGTLQGRNSIGDFLEEVGERLKRELQGKTLKKGSVVQASGIETLHNEKPSDPTGIAHHIAKEVIDAEGNLLRSESTRSHNSEIQFYGSSSPQFFNRETRRFLSERLRNIKKSEAHFDIPEATCGNSRPYMIDNNRVRLKQEEDTTNCANDMSHWEILKVKKEIQTGSFRHEPDDNVLLHKELSPRNLVRSLSAPVSGTSFGNLLLEDSHILTGVRIQRKLEAVETMPVNENFTEVPPSPVSVCTCAQESPISTPDVSSTEGIAMPKVFRDISSGLNELRRQLSQLDSDCPEDLTTKQEPVESELVQMEDPAESYIRDLLVASGLYFGSWDKSLLIGDTLAKPIGNSVFEEVEESHKELVKENERSIKDPYENKLEHKILLDLLNEALSIVLGPPLTFSAFRNKLSNSSMQPPPCGKELLKLVWDIIHVSLYPPSNTTPYSLDSLVAQDLGSMSWSGPINDQINILQREIAYLIIGDLVEEVAKDMLLGVV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi779g00013 791 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 29 531 - -
Gabi779g00013 791 Pfam Domain of unknown function (DUF4378) 614 781 IPR025486 -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 111 126 - -
Gabi779g00013 791 Pfam DUF761-associated sequence motif 70 83 IPR032795 -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 242 261 - -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 107 126 - -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 139 158 - -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 197 211 - -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 1 24 - -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 193 224 - -
Gabi779g00013 791 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi779g00013 Gabi-Chr779 158339 162206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi779g00013 530 786 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 42.857 7.86e-53 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi779g00013 - - gmx:100789616 843.958