Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi776g00019 ATGGGAATGGAGAGAGAGGATCACAAAACGAAGGCAATGAATATGCTTCGAAGCAGAATCTGTGACCCCAAATTCATCTTCAATTTCAACGATGCTCCTGACAGCAACTACAGCAAGCTCAAATTCATGATGTCAAGTTCGGTGACGGAGGCGTGCAACAATTCTATTCTGCTTCTCGGTCCCCGTGGCTCCGGGAAGATCGCGGTTTTGGAGCTTGTTATTCAAGATTTGTTGCTGCAATATCCCGATTCAATTTCAGTGATCAGGTTGAGTGGGCTTTTGCACAGTGATGACATATCCGCATTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCATTTGCTGTTCTCAAAAGCGGCTTCTTTTGATGACAACTCCCAGTTTATGGTAGCCATGCTAAAGGAATGCGGATTAGCACATAAAACAGTAATTTTTATTCTTGATGAGTTTGACCTCTTTGCTCAGGGTAAACAGCGGCTACTTTATAGCTTGCTAGATGCAATGCAGTCAGTAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGGCTGGATGCAGATCAGCTGTTGGAGAAAAGAGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTTTTACCACCTTCAATGGAAGACTCTCAGAGATTACTGCTGCACATGCTGACACTACCAGTAGATTCAAGCTTTCCAGATGATTATGCTGTTGAATTTAATAGAAAGGTCCAAAATATTATAGAAGACAGAAGGTTCAAAGAAACCTTCAATAAATTTTTAAATTTTGACTCGTCTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACCGGGTTTCTGTCCCAGGAGAACTTTGAAAGTGCATTTTCAAGTATCCAGAGGCAGCCCAAACTGGAATGTTTAAGAAATTGCTCCATTTTAGAACTTTATATTTTGGTTTGCATGAAGAGATTGGAGGTTAAAGAGCAAAGTTTATGCAACTTCAATTCTGTAATGAAAGAGTATAAAAGTATACATGATTCCTTCCGGACTTCTGATTATCATGCGCGGAATGTTTGCTTAAGGGCATTTGAACATCTTATACATCGTGAATTAGTATGTTTCACGGACAATAGAGGACATAGTTTGTCCGTTGAATTCCGTCCTGTAAAGCTTTTAGTCTCATCTGCGGAACTACATCAGGGACTGAAAGCATATCATTCATGCCCAGCTATCCTTCAAAAGTTAATGGATCGTGAAGGCTAA 1263 0.407 MGMEREDHKTKAMNMLRSRICDPKFIFNFNDAPDSNYSKLKFMMSSSVTEACNNSILLLGPRGSGKIAVLELVIQDLLLQYPDSISVIRLSGLLHSDDISAFKEIARQLCMEHHLLFSKAASFDDNSQFMVAMLKECGLAHKTVIFILDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQRLLLHMLTLPVDSSFPDDYAVEFNRKVQNIIEDRRFKETFNKFLNFDSSVKHLLRFLFCAVSHMDLQTGFLSQENFESAFSSIQRQPKLECLRNCSILELYILVCMKRLEVKEQSLCNFNSVMKEYKSIHDSFRTSDYHARNVCLRAFEHLIHRELVCFTDNRGHSLSVEFRPVKLLVSSAELHQGLKAYHSCPAILQKLMDREG 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi776g00019 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 253 IPR027417 -
Gabi776g00019 420 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 10 419 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gabi776g00019 420 PIRSF ORC4 3 420 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gabi776g00019 420 Gene3D - 34 208 IPR027417 -
Gabi776g00019 420 FunFam Origin of replication complex subunit 4 34 208 - -
Gabi776g00019 420 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 400 IPR032705 -
Gabi776g00019 420 Pfam ATPase family associated with various cellular activities (AAA) 56 202 IPR003959 GO:0005524|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi776g00019 3 417 Core DNA Replication Machinery Family AT2G01120 65.248 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi776g00019 K02606 - gmx:100800582 709.909