Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi775g00017 ATGGTAGTTAGGAAAGTTGGTAAGTATGAGATTGGGAGGACGATTGGGGAGGGAACCTTTGCGAAGGTGAAGTTCGCTCAGAACACAGAGACCGGCGAGAGTGTGGCCATGAAGGTGCTCGACCGTAACACCATCATCAAGCACAAGATGGTCGACCAGATCAAGAGGGAGATTTCCATTATGAAGCTAGTCAGGCATCCTTATGTTGTTCGTCTGCATGAGGTTCTTGCTAGCCGTACTAAGATTTATATCATATTGGAGTTCATTACAGGTGGTGAATTGTTTGATAAAATTATACACCATGGGCGTCTTAGTGAAGCTGAATCTAGAAGATATTTCCAACAGCTTATTGATGGTGTAGATTACTGCCACAGTAAGGGAGTTTATCACAGAGATTTAAAGCCTGAGAATCTTTTACTTGATTCAGAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTGCCTGAGCAGGGAGTGAGTATCCTTCGAACAACTTGTGGGACTCCAAACTATGTTGCTCCTGAGGTACTCAGTCACAAGGGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTTTATGTCTTATTGGCTGGATATCTTCCCTTTGATGAGCTTGATCTAACCACCTTATACAGTAAGATTGAGAAAGCAGAGTTTTCATGCCCTCCTTGGTTTCCTGTGGGTGCAAAATCGTTGATACATAGAATTTTGGATCCAAATCCTGAAACCCGTATAACCATTGAACAGATAAGAAATGATGAATGGTTTCAGAGGGGACATGTTCCCGTCAGTCTTCTCGAGTATGAAGATGTAAATCTGGATGATGTAAATGCCGCTTTTGATGATGCTGAGGGACAGACGGCTAATCAACAATGTGATAATGAGGACATGGGTCCTTTAATGCTTAATGCATTTGACTTGATAATTCTATCACAAGGCTTAAACCTTGCAACAATGTTTGATCGTGGACAGGACTCTGTGAAGTACCAAACCCGCTTTATCTCTCAAAAGCCAGCTAAAGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACGCATATTCGCAACTACAAGATTTTTGAAGTGGCTCCCACATTTTATATGGTAGACATTCAGAAAGCAGCTGGAGATGCAGGTGAATACCTCAAGTTTTACAAGAACTTTTGTAACAATCTTGAGGATATAATCTGGAAACCGCCTCATGAAGCAAGCAAATCAAGGATCTCTAAAACTAAAAGCAAAAGACGATAG 1284 0.4128 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRNTIIKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIIHHGRLSEAESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSEGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLLAGYLPFDELDLTTLYSKIEKAEFSCPPWFPVGAKSLIHRILDPNPETRITIEQIRNDEWFQRGHVPVSLLEYEDVNLDDVNAAFDDAEGQTANQQCDNEDMGPLMLNAFDLIILSQGLNLATMFDRGQDSVKYQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKIFEVAPTFYMVDIQKAAGDAGEYLKFYKNFCNNLEDIIWKPPHEASKSRISKTKSKRR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi775g00017 427 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi775g00017 427 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Gabi775g00017 427 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi775g00017 427 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Gabi775g00017 427 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Gabi775g00017 427 Pfam NAF domain 305 363 IPR004041 GO:0007165
Gabi775g00017 427 Gene3D Transferase(Phosphotransferase) domain 1 3 305 - -
Gabi775g00017 427 CDD CIPK_C 309 400 - -
Gabi775g00017 427 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 394 - -
Gabi775g00017 427 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Gabi775g00017 427 SUPERFAMILY Protein kinase-like (PK-like) 6 277 IPR011009 -
Gabi775g00017 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Gabi775g00017 427 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi775g00017 427 Gene3D Kinase associated domain 1, KA1 306 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi775g00017 Gabi-Chr775 119784 126314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi775g00017 1 370 CBL-interacting serine-threonine protein kinases AT4G24400 83.514 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi775g00017 Pkinase 6.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi775g00017 - - gmx:100785444 789.645