Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi771g00013 ATGAATACAAGTTTCCGTCGTTTCTTCTTCCCCTTGTTCCTTGCTGCTTTTTGCTTTGCCTCCTTAGCTTTTGGTGCCACTCTGTCTAAAGATGAAGTGCAAGCTTTGAGAGGTATAGCTAAGACACTTGGGAAGCAGGATTGGGATTTCAGTGTAGATCCATGCAGTGGAGAAAGTAACTGGACATCATCTGTTCAAGTGAAAGGGAGCGAAAATGCTGTCATATGCAATTGCTCATTTGTCAATGGCACCCTCTGTCATATCACTAACATACTTTTGAAACAACAAAATCTCCCAGGCACTCTTCCACCGGAACTGATCAGGTTACCTTACCTTCAAGAAATTGATCTCACTCGCAACTACCTGAACGGTACAATTCCTAAAGAATGGGGTTCTATGAATCTTGTAAACATTTCTCTCCTTGGGAATCGATTAACGGGTTCAATACCAGTAGAGATAGCAAACATATCCACTCTCCAAAGTTTGGTCTTGGAGACCAATCAATTATCTGGAAATCTTCCTCCAGAGCTTGGGAATCTATCACAGATTCAAAGACTTCTACTTTCCTCCAACAATTTCATTGGAGAACTACCAGTAACATTGGCCAAGCTCACTACATTGCAGGATATTCGAATTGGGGATAATCAATTCTCTGGGAAGATACCTGATTTTATTCAAAGCTGGACAAGTCTCCAAAAACTAATTATTCAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTAAAATTTCACTTCTGCAAAACTTGACAGACTTGAGAATTAGTGACCTGAATGGATCTGAATATTCTCCTTTTCCACAACTTAGTAATATGAGATTAAAATATCTGGTTCTGAGGAATTGCAACATTAATGGAACACTACCTGCATATCTTGGGACGATGACAAGCTTAAAAAACTTAGACCTCAGCTTTAACAAATTGAGTGGACAAATTCCGAGTACCTATGATAGCCTAAGAAAAGTGGATTACATATATTTAACTGGAAACCTTCTCACTGGACCAGTGCCTGCATGGACAGAGAAAGCGGATAACGTAGATATTTCATATAATAACTTCAGCATCGGAAGCCAAGGAAGTCAGACATGTCAAGATGGAAATGTGAACTTGTTTGCTAGCTCTTTGACGCGCAATGACTCAGGAACGGTTTCATGTTTGAGAAGCTTTGTCTGTCCTCAAACCTCATACTCTCTTCACATAAATTGTGGTGGGAAGCTGGTAACATTCAATGGAAGCACATATGATGATGATTTAGATGCAGCAGGACCAGCTAGATTCCACCAGAGTGGAACAAGAAACTGGGCATTTAGCAGCACTGGTAACTTCATGGATAATGATGGTGGAGACTACTATACTTGGTCAAATAAGTCTAGGCTTCCTATGGTCAATTCTGAACTGTACATGACTGCACGAGTTTCTCCCATTTCTCTGACTTACTATGGATTTTGCCTGGGAAATGGAAACTACACGGTAAATCTACATTTTGCAGAAATCATGTTCAATGATGATCAAACATTTAACAACCTAGGAAGGCGTGTATTTGACATCTACATTCAGGGAAAGCTAGTGCAGAAGGACTTCAATATTGCAGAAGAAGCAGGAGGAATTGGTAAGGCAGTCACAAAACCATTCACTGCTGTTGTGACTAGTAATACCTTGGAGATCCGTTTATATTGGGCTGGGAAAGGCACAACTGGTATCCCATTTAGATCAGTATATGGCCCTCTGATATCAGCTATATCTGTGGATTCTGACTTTCCACCTCCCTCGGAAAATGGAAGCAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGCTGCAGGAGCAATTATTATCATCCTGGTATTTGGTACACTTTGGTGGAAAGGCTGTTTTGGAAAGAAAAACACGTTAGCAAGAGAGCTAAAGGGTTTAGACATGCAAACGGGTCTATTTACCTTAAGACAAATCAAAGCAGCAACAAACAACTTTGATATTGACAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATTTCTATCAGATGGGACAATAATAGCGGTCAAGCAGCTTTCTTCTAAATCAAGGCAAGGGAATCGTGAATTTTTGAATGAGATAGGCATGATTTCTGCTTTGCAGCATCCTTGTCTTGTTAAACTCTGTGGATGTTGTGTGGAGGGAGATCAACTATTGCTGGTATATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGCCCAGAAGAATACCAAATAAAATTGGATTGGCCAACAAGACACAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCATACCTTCATGAAGAATCAAGACTGAAGGTTGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCAAAGATATCAGACTTTGGTTTGGCCAAGCTTGATGAAGAGGACAACACCCATATTAGCACCCGAATAGCTGGCACATATGGCTATATGGCTCCGGAATATGCAATGCGTGGTTATTTGACTGACAAAGCAGATGTCTATAGCTTTGGAATTGTTGCCTTGGAAATCATACACGGAAGGAGCAATACCACTCAGAGACAAAAAGAAGAAGCATTTCATCTTCTTGATTGGGCACTTCTGTTGAAAGAGAAAGGTAATCTAATGGAGCTAGTTGATAGAAGATTGGGTTCAGACTTAAACAAAGATGAGGTAATGGTGATGATCAACGTGGCTCTCCTATGCACTAATGTGTCTCCTGCACTTAGGCCTACCATGTCTTCAGTGGTAAGCATGCTAGAAGGAAGAAGTGTTGTTCAGGAAGTGGTTTCAGAGCAAAGTGAGGTGTTGGATGGGAAGAAGTTGGAGGCAATGCGACAGTATTACAATGACCAGAGTGTCTCAATGGAGGGGCCATTGACTAGTTCATCTACTTCTGTAACAGATCTCTATCCTGTATCCCTGGGTTCTACATACTGGGAGAACAGAGATTAA 2994 0.4102 MNTSFRRFFFPLFLAAFCFASLAFGATLSKDEVQALRGIAKTLGKQDWDFSVDPCSGESNWTSSVQVKGSENAVICNCSFVNGTLCHITNILLKQQNLPGTLPPELIRLPYLQEIDLTRNYLNGTIPKEWGSMNLVNISLLGNRLTGSIPVEIANISTLQSLVLETNQLSGNLPPELGNLSQIQRLLLSSNNFIGELPVTLAKLTTLQDIRIGDNQFSGKIPDFIQSWTSLQKLIIQGSGLSGPIPSKISLLQNLTDLRISDLNGSEYSPFPQLSNMRLKYLVLRNCNINGTLPAYLGTMTSLKNLDLSFNKLSGQIPSTYDSLRKVDYIYLTGNLLTGPVPAWTEKADNVDISYNNFSIGSQGSQTCQDGNVNLFASSLTRNDSGTVSCLRSFVCPQTSYSLHINCGGKLVTFNGSTYDDDLDAAGPARFHQSGTRNWAFSSTGNFMDNDGGDYYTWSNKSRLPMVNSELYMTARVSPISLTYYGFCLGNGNYTVNLHFAEIMFNDDQTFNNLGRRVFDIYIQGKLVQKDFNIAEEAGGIGKAVTKPFTAVVTSNTLEIRLYWAGKGTTGIPFRSVYGPLISAISVDSDFPPPSENGSSISAGAVVGIVAAGAIIIILVFGTLWWKGCFGKKNTLARELKGLDMQTGLFTLRQIKAATNNFDIDNKIGEGGFGPVYKGFLSDGTIIAVKQLSSKSRQGNREFLNEIGMISALQHPCLVKLCGCCVEGDQLLLVYEYMENNSLARALFGPEEYQIKLDWPTRHKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMRGYLTDKADVYSFGIVALEIIHGRSNTTQRQKEEAFHLLDWALLLKEKGNLMELVDRRLGSDLNKDEVMVMINVALLCTNVSPALRPTMSSVVSMLEGRSVVQEVVSEQSEVLDGKKLEAMRQYYNDQSVSMEGPLTSSSTSVTDLYPVSLGSTYWENRD 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi771g00013 997 FunFam Leucine-rich repeat transmembrane protein kinase 200 403 - -
Gabi771g00013 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Gabi771g00013 997 Gene3D - 398 590 - -
Gabi771g00013 997 Pfam Protein kinase domain 663 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi771g00013 997 SUPERFAMILY Protein kinase-like (PK-like) 645 940 IPR011009 -
Gabi771g00013 997 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi771g00013 997 Gene3D Ribonuclease Inhibitor 197 273 IPR032675 -
Gabi771g00013 997 SUPERFAMILY L domain-like 80 343 - -
Gabi771g00013 997 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515
Gabi771g00013 997 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Gabi771g00013 997 CDD STKc_IRAK 668 935 - -
Gabi771g00013 997 Gene3D Ribonuclease Inhibitor 274 384 IPR032675 -
Gabi771g00013 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 32 191 - -
Gabi771g00013 997 Gene3D Phosphorylase Kinase; domain 1 631 737 - -
Gabi771g00013 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 400 590 - -
Gabi771g00013 997 ProSiteProfiles Protein kinase domain profile. 662 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi771g00013 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Gabi771g00013 997 Pfam Malectin domain 402 585 IPR021720 -
Gabi771g00013 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 737 - -
Gabi771g00013 997 Gene3D Transferase(Phosphotransferase) domain 1 738 950 - -
Gabi771g00013 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi771g00013 Gabi-Chr771 168503 178610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi771g00013 22 982 Receptor kinase-like Gene Family AT1G53420 57.949 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi771g00013 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi771g00013 - - gmx:732563 1577.38