Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi771g00003 ATGACGTCAGGAACGAGGCAGCCAACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGGAGGAGAGCCATAGCTGCGAAGATCTTCGCCGGTTTGAGAATGTACGGCAACTACAAGCTCCCTAAGCATTGCGATAACAATGAAGTTCTCAAAGCTCTCTGCAACGAGGCCGGGTGGATCGTTGAACCGGACGGCACCACTTATCGCAAGGGATGCAAGCCTGTTGAACGCATGGAGATAGGTGGTTCTGCAGCGGCAACCCCATGTTCATCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCAAGTCCGGGCTCTTCTTCCTTCCCTAGCCCACGCTCATCTTCCTATGCTGCAAATCCTAATGCTGATGGCAATTCCCTCATTCCATGGCTTAAAAACCTCTCATCTGGTTCATCATCAGCGTCCTCATCCAAGCTTCCGATGCTATATATTCCTAGTGGCTCCATCAGCGCTCCAGTCACTCCTCCACTGAGCTCTCCAACTGCCCGAACACCCCGAATGAAAGCTACAGCTACATGGGAGGATCAGTCCATTCATCCTGGGTGGGGTGGGCAGCAGTACTCCTTCCTGCCCTCTTCCACTCCTCCAAGCCCTGGCCGCCAGGCTCTTGACCCGGATTGGTTTGCTGGAATTAGGATTCCCCAGGGTGGGCCAACTTCTCCAACCTTTAGCCTGGTCTCTTCTAATCCATTTGGCTTCAAGGAAGAGGTTTTCGTTGGCAGTGGTTCCCGCATGTGGACACCTGGTCAAAGTGGGACATGTTCTCCAGCTGTAGCTGCTGGCTCTGATCACACTGCTGACATTCCAATGGCTGAAGCGGTTTCAGATGAATTTGCCTTTGGTAGCAGCACAGCAGGTTTAGTGAAGGCCTGGGAAGGAGAGAGGATCCATGAAGTGTTCGGATCAGATGATCTGGAGCTCACTCTTGGGAACTCAAAGACCAGGTAA 978 0.5256 MTSGTRQPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCKPVERMEIGGSAAATPCSSYHPSPCASYNPSPGSSSFPSPRSSSYAANPNADGNSLIPWLKNLSSGSSSASSSKLPMLYIPSGSISAPVTPPLSSPTARTPRMKATATWEDQSIHPGWGGQQYSFLPSSTPPSPGRQALDPDWFAGIRIPQGGPTSPTFSLVSSNPFGFKEEVFVGSGSRMWTPGQSGTCSPAVAAGSDHTADIPMAEAVSDEFAFGSSTAGLVKAWEGERIHEVFGSDDLELTLGNSKTR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi771g00003 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Gabi771g00003 325 MobiDBLite consensus disorder prediction 102 122 - -
Gabi771g00003 325 MobiDBLite consensus disorder prediction 1 22 - -
Gabi771g00003 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 138 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi771g00003 Gabi-Chr771 66228 70699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi771g00003 1 325 BZR Transcription Factor Family AT1G78700 73.512 1.00e-140 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gabi771g00003 BES1_N 1.7e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi771g00003 - - cill:122280541 533.872