Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi770g00013 ATGGAGAGTAGGGTACCCTTTGTCCTGTCCTGTCTCTCACTCATGCTGCTACTTCTCTTGCGTCTTTCCTCTTCTCAGATGCCAGGTTTCGTAAGTTTGGACTGTGGAGGTAAAGAAAATTTCACTGATGAAATTGGTCTTAGATGGACTCCTGATGATAAACTTACTTATGGAGAAATAAGTACTATATCAGTTGTCAATGAGACACGAAAGCAATACATGACACTTCGACACTTTCCCGCTGATTCCAGAAAATACTGCTACACATTTGATGTTGTCAGTAGGACAAGGTACCTACTGAGGGCAACATTCTTGTATGGGAACTTTGACAGAAACAATGTTTATCCAAAATTTGACATTTCTGTTGGGGCTACTCATTGGTCTACTATTGTTATATCTGATGCTAATACTATAGAAGTGAGAGAGCTTATATTTTTGGCTTCAAGTCCTACAGTTAGTGTATGTTTATCAAATGCAACAACTGGGCAGCCATTCATATCTACACTTGAACTCCGGCAATTCAATGGTTCGGTTTATTATACAGCCTATGAGGAACACTTTTACCTCAGAGTCTCCGCGAGGATAAATTTTGGTGCAGAAAGTGATGCCCCAATCAGGTATCCTGATGACCCATTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTATCTTGTTGATGTTGCTGTTGGAACTGAGAAAATTTCCACCAAAGTACCAATTGAAGTTAACAAAGATGAAATGCCACCAATGAAAGTATTGCAGACAGCTGTTGTGGGTACAAATGGATCTCTAACTTACCGGTTGAACTTGGAAGGTTTTCCTGGTATTGGATGGGCTGTAACCTATTTTGCAGAGATTGAAGATTTGGCTCCAGATGAAACCAGAAAATTCAGGCTAATACTTCCAGGCCAGCCTGATATGAGTAAGGCTGTGGTAAATATTGAAGAAAATGCTCTAGGAAAATATCGCCTTTATGAACCAGGATATACCAATCTATCCCTTCCATTTGTGCTGTCCTTTAGATTTGGCAAGACATCTGATTCTTCCAGGGGCCCTCTTCTAAATGCCATGGAGATAAATAAGTATCTGGAGAAAAATGATGGCTCTCCTGATGGAGAAGCTATATTTAGTGTACTTTCACACTACTCTGCATCAGATTGGGCACAAGAAGGGGGTGACCCTTGTCTACCTGTTCCATGGTCATGGGTACGATGTAGCTCAGATATACAACCAAGAATAGTTTCAATTGTGTTATCTGGTAAAAACTTGACGGGCAATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGAAATAAGTTGACTGGCCCAATACCAGATTTTACTGGATGCATGGACTTAAGGATCATTCATCTTGAGAACAATCAGTTGACGGGTGCACTCCCAACCTCTTTGAGGAACCTTCCAAATTTGAGAGAACTGTATGTCCAAAATAATATGTTATCTGGAACCGTACCATCAGATCTTCTGATCAAAGGTTTGGTTTTGAACTACTCTGGAAACTTTAATCTTCATAAAGGAATCAGAAAAAAGAGCCACATGTATGTGATTATTGGTTCAGCAGTTGGGGCTGCCGTTCTACTTTTGGCTACTGTTATATCTTGCTTTTTTATGCATACAGGAAAGAGAAAATATTATGAGCAAGGCAGCCTTGTTTCTCTCCCTTCTCAAAATCTGGATTCTTCTAAGAGAGATGGTCCTGCAGAAGCTGCTCACTGTTTCAGTTTTTCTGAAATTGAAAATTCTACAAATAATTTTGAGAAAAAAATTGGTTCTGGAGGTTTTGGAGTAGTTTATTATGGGAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCAGTAATTCCTATCAAGGCAAACGAGAGTTCTCCAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAGCTTCTTGGGTATTGCCGAGAAGAGGGGAATAGTATGCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTACGGCCCATTAACACATGGACGGAGTATCAATTGGATTAAGCGCCTTGAGATTGCAGAAGATGCTGCAAAAGTTATCCATAGAGACTTAAAAAGCAGCAACATTCTTCTTGACAAAGACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTTGCTATTGATGGAGTCTCCCATGTTTCTAGCATAGTTCGAGGGACAGTAGGATATCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACTGACAAGAGTGATATTTATAGTTTTGGTGTAATTCTTCTTGAACTCATTTCTGGGCAAGAAGCAATATCTAATGACAGTTTTGGAGCTAATTGCCGAAACATAGTCCAGTGGGCCAAATTACACATTGAGAGTGGAGATATACAAGGCATTATTGATCCGGCGTTAAGAAAAAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGACATATGAGGCCATCAATATCAGAAGTTCTAAAGGAGATACAAGATGCACTTGCTATTGAGAGAGAGGCCGAAGGCAATTTAGATGAGATGCCAATAAATTCTGTTCATTCTTTCATGACTACGGGTCTTGGTGCAACTGATAGTTACCTTTCAATTGATGAATCCATTGGACAGCCTGCTGCACGATAG 2730 0.3967 MESRVPFVLSCLSLMLLLLLRLSSSQMPGFVSLDCGGKENFTDEIGLRWTPDDKLTYGEISTISVVNETRKQYMTLRHFPADSRKYCYTFDVVSRTRYLLRATFLYGNFDRNNVYPKFDISVGATHWSTIVISDANTIEVRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTAYEEHFYLRVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAVGTEKISTKVPIEVNKDEMPPMKVLQTAVVGTNGSLTYRLNLEGFPGIGWAVTYFAEIEDLAPDETRKFRLILPGQPDMSKAVVNIEENALGKYRLYEPGYTNLSLPFVLSFRFGKTSDSSRGPLLNAMEINKYLEKNDGSPDGEAIFSVLSHYSASDWAQEGGDPCLPVPWSWVRCSSDIQPRIVSIVLSGKNLTGNIPLDITKLTGLVELWLDGNKLTGPIPDFTGCMDLRIIHLENNQLTGALPTSLRNLPNLRELYVQNNMLSGTVPSDLLIKGLVLNYSGNFNLHKGIRKKSHMYVIIGSAVGAAVLLLATVISCFFMHTGKRKYYEQGSLVSLPSQNLDSSKRDGPAEAAHCFSFSEIENSTNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDAAKVIHRDLKSSNILLDKDMRAKVSDFGLSKLAIDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPALRKNYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDALAIEREAEGNLDEMPINSVHSFMTTGLGATDSYLSIDESIGQPAAR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi770g00013 909 ProSiteProfiles Protein kinase domain profile. 600 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi770g00013 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Gabi770g00013 909 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Gabi770g00013 909 Pfam Protein kinase domain 602 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi770g00013 909 SUPERFAMILY Protein kinase-like (PK-like) 586 861 IPR011009 -
Gabi770g00013 909 SUPERFAMILY L domain-like 401 518 - -
Gabi770g00013 909 Gene3D Transferase(Phosphotransferase) domain 1 676 880 - -
Gabi770g00013 909 Gene3D Phosphorylase Kinase; domain 1 574 675 - -
Gabi770g00013 909 Gene3D Ribonuclease Inhibitor 378 532 IPR032675 -
Gabi770g00013 909 Pfam Malectin-like domain 33 363 IPR024788 -
Gabi770g00013 909 FunFam Leucine-rich repeat receptor-like protein kinase 576 675 - -
Gabi770g00013 909 PANTHER OS07G0107800 PROTEIN-RELATED 463 864 - -
Gabi770g00013 909 CDD STKc_IRAK 606 861 - -
Gabi770g00013 909 FunFam Leucine-rich repeat protein kinase family protein 376 526 - -
Gabi770g00013 909 SMART serkin_6 600 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi770g00013 909 Pfam Leucine rich repeat 440 497 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi770g00013 Gabi-Chr770 116722 123792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi770g00013 23 709 Receptor kinase-like Gene Family AT2G37050 68.732 0.0 1000
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gabi770g00013 Malectin_like 2.7e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi770g00013 - - gmx:100808055 1570.44