Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi770g00012 ATGGAGAGTAGGGTACCCTTTGTCCTGTCCTGTCTCTCACTCATGCTGCTACTTCTCTTGCGTCTTTCCTCTTCTCAGATGCCAGGTTTCGTAAGTTTGGACTGTGGAGGTAAAGAAAATTTCACTGATGAAATTGGTCTTAGATGGACTCCTGATGATAAACTTACTTATGGAGAAATAAGTACTATATCAGTTGTCAATGAGACACGAAAGCAATACATGACACTTCGACACTTTCCCGCTGATTCCAGAAAATACTGCTACACATTTGATGTTGTCAGTAGGACAAGGTACCTACTGAGGGCAACATTCTTGTATGGGAACTTTGACAGAAACAATGTTTATCCAAAATTTGACATTTCTGTTGGGGCTACTCATTGGTCTACTATTGTTATATCTGATGCTAATACTATAGAAGTGAGAGAGCTTATATTTTTGGCTTCAAGTCCTACAGTTAGTGTATGTTTATCAAATGCAACAACTGGGCAGCCATTCATATCTACACTTGAACTCCGGCAATTCAATGGTTCGGTTTATTATACAGCCTATGAGGAACACTTTTACCTCAGAGTCTCCGCGAGGATAAATTTTGGTGCAGAAAGTGATGCCCCAATCAGGTATCCTGATGACCCATTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTATCTTGTTGATGTTGCTGTTGGAACTGAGAAAATTTCCACCAAAGTACCAATTGAAGTTAACAAAGATGAAATGCCACCAATGAAAGTATTGCAGACAGCTGTTGTGGGTACAAATGGATCTCTAACTTACCGGTTGAACTTGGAAGGTTTTCCTGGTATTGGATGGGCTGTAACCTATTTTGCAGAGATTGAAGATTTGGCTCCAGATGAAACCAGAAAATTCAGGCTAATACTTCCAGGCCAGCCTGATATGAGTAAGGCTGTGGTAAATATTGAAGAAAATGCTCTAGGAAAATATCGCCTTTATGAACCAGGATATACCAATCTATCCCTTCCATTTGTGCTGTCCTTTAGATTTGGCAAGACATCTGATTCTTCCAGGGGCCCTCTTCTAAATGCCATGGAGATAAATAAGTATCTGGAGAAAAATGATGGCTCTCCTGATGGAGAAGCTATATTTAGTGTACTTTCACACTACTCTGCATCAGATTGGGCACAAGAAGGGGGTGACCCTTGTCTACCTGTTCCATGGTCATGGGTACGATGTAGCTCAGATATACAACCAAGAATAGTTTCAATTGTGTTATCTGGTAAAAACTTGACGGGCAATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGAAATAAGTTGACTGGCCCAATACCAGATTTTACTGGATGCATGGACTTAAGGATCATTCATCTTGAGAACAATCAGTTGACGGGTGCACTCCCAACCTCTTTGAGGAACCTTCCAAATTTGAGAGAACTGTATGTCCAAAATAATATGTTATCTGGAACCGTACCATCAGATCTTCTGATCAAAGGTTTGGTTTTGAACTACTCTGGAAACTTTAATCTTCATAAAGGAATCAGAAAAAAGAGCCACATGTATGTGATTATTGGTTCAGCAGTTGGGGCTGCCGTTCTACTTTTGGCTACTGTTATATCTTGCTTTTTTATGCATACAGGAAAGAGAAAATATTATGAGCAAGGCAGCCTTGTTTCTCTCCCTTCTCAAAATCTGGATTCTTCTAAGAGAGATGGTCCTGCAGAAGCTGCTCACTGTTTCAGTTTTTCTGAAATTGAAAATTCTACAAATAATTTTGAGAAAAAAATTGGTTCTGGAGGTTTTGGAGTAGTTTATTATGGGAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCAGTAATTCCTATCAAGGCAAACGAGAGTTCTCCAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAGCTTCTTGGGTATTGCCGAGAAGAGGGGAATAGTATGCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTACGGCCCATTAACACATGGACGGAGTATCAATTGGATTAAGCGCCTTGAGATTGCAGAAGATGCTGCAAAAGGGATTGAATATCTTCACACAGGCTGTGTTCCTGCAGTTATCCATAGAGACTTAAAAAGCAGCAACATTCTTCTTGACAAAGACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTTGCTATTGATGGAGTCTCCCATGTTTCTAGCATAGTTCGAGGGACAGTAGGATATCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACTGACAAGAGTGATATTTATAGTTTTGGTGTAATTCTTCTTGAACTCATTTCTGGGCAAGAAGCAATATCTAATGACAGTTTTGGAGCTAATTGCCGAAACATAGTCCAGTGGGCCAAATTACACATTGAGAGTGGAGATATACAAGGCATTATTGATCCGGCGTTAAGAAAAAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGACATATGAGGCCATCAATATCAGAAGTTCTAAAGGAGATACAAGATGCACTTGCTATTGAGAGAGAGGCCGAAGGCAATTTAGATGAGATGCCAATAAATTCTGTTCATTCTTTCATGACTACGGGTCTTGGTGCAACTGATAGTTACCTTTCAATTGATGAATCCATTGGACAGCCTGCTGCACGATAG 2766 0.3977 MESRVPFVLSCLSLMLLLLLRLSSSQMPGFVSLDCGGKENFTDEIGLRWTPDDKLTYGEISTISVVNETRKQYMTLRHFPADSRKYCYTFDVVSRTRYLLRATFLYGNFDRNNVYPKFDISVGATHWSTIVISDANTIEVRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTAYEEHFYLRVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAVGTEKISTKVPIEVNKDEMPPMKVLQTAVVGTNGSLTYRLNLEGFPGIGWAVTYFAEIEDLAPDETRKFRLILPGQPDMSKAVVNIEENALGKYRLYEPGYTNLSLPFVLSFRFGKTSDSSRGPLLNAMEINKYLEKNDGSPDGEAIFSVLSHYSASDWAQEGGDPCLPVPWSWVRCSSDIQPRIVSIVLSGKNLTGNIPLDITKLTGLVELWLDGNKLTGPIPDFTGCMDLRIIHLENNQLTGALPTSLRNLPNLRELYVQNNMLSGTVPSDLLIKGLVLNYSGNFNLHKGIRKKSHMYVIIGSAVGAAVLLLATVISCFFMHTGKRKYYEQGSLVSLPSQNLDSSKRDGPAEAAHCFSFSEIENSTNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDAAKGIEYLHTGCVPAVIHRDLKSSNILLDKDMRAKVSDFGLSKLAIDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPALRKNYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDALAIEREAEGNLDEMPINSVHSFMTTGLGATDSYLSIDESIGQPAAR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi770g00012 921 FunFam Leucine-rich repeat receptor-like protein kinase 576 675 - -
Gabi770g00012 921 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Gabi770g00012 921 FunFam Leucine-rich repeat protein kinase family protein 376 526 - -
Gabi770g00012 921 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 676 885 - -
Gabi770g00012 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Gabi770g00012 921 Gene3D Transferase(Phosphotransferase) domain 1 676 892 - -
Gabi770g00012 921 Gene3D Phosphorylase Kinase; domain 1 574 675 - -
Gabi770g00012 921 Pfam Malectin-like domain 33 363 IPR024788 -
Gabi770g00012 921 ProSiteProfiles Protein kinase domain profile. 600 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi770g00012 921 SUPERFAMILY Protein kinase-like (PK-like) 584 870 IPR011009 -
Gabi770g00012 921 Pfam Leucine rich repeat 440 497 IPR001611 GO:0005515
Gabi770g00012 921 SUPERFAMILY L domain-like 401 517 - -
Gabi770g00012 921 Gene3D Ribonuclease Inhibitor 378 532 IPR032675 -
Gabi770g00012 921 PANTHER OS07G0107800 PROTEIN-RELATED 463 876 - -
Gabi770g00012 921 SMART serkin_6 600 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi770g00012 921 CDD STKc_IRAK 606 873 - -
Gabi770g00012 921 Pfam Protein tyrosine and serine/threonine kinase 602 817 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi770g00012 Gabi-Chr770 116722 123792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi770g00012 23 710 Receptor kinase-like Gene Family AT2G37050 68.777 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gabi770g00012 Malectin_like 2.8e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi770g00012 - - gmx:100808055 1605.88