Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi770g00011 ATGTATAGTGTTGAGCAGGTACTGCCGTACTGGGAAGCACTGCATACTGCTTCTGATGGAAATGATAACTTGCTTCTGTGTGATGACAATGGTGAAAACCCAGCATGGGAAGCCATTGGATATGAAGTTGACACTGATGGGAACACAAGTCTTCAAGTTGCTGTGGATGCTGAAAACAAATTGGTCAAGATGAAATCATGTGATGTAGTAATTGTTGGGTCTGGTTGTAGGGGAGGAGATGCAGCTGCTGTTCTTGCAAGTTCAGGACTGAAGGTGCTTGTTCTTGAGAAGGGTGAAGAAGGCCTTGGGGTGAATGAATCATTTGTGTATGAGTTATGCACTGACATTGTTGATGCTGCATTACATGCTGATGTGATGAAAAGTGTGAAATATATGGTAGAGCACTTGGTGAGTAAGAGCAGGGTGTTGTTATACCAAGGTCGACATGATTTGAGGGATAGAGTGGTACAAGTTGAGGCATGGGTCAAGACAATGAAATGGGAAGGAATTTTGGAGTTTCTGAATGCAGAAAGGAAGATTTGGAAGGTGAATGGAGAGCTTTCTGGGTATGTACAAAGTTGGAAGACACTCACCAATGTTGTGGTTTTGGGTACTGGGCATCTTGTGCCTACTGAGAAGGCTGTGAATTCTCAAGCAATGATAGAAGACTGGGTTTTGGGAAGGAGAACTGTATTATACTTCACAGTTAATGAATAA 717 0.4268 MYSVEQVLPYWEALHTASDGNDNLLLCDDNGENPAWEAIGYEVDTDGNTSLQVAVDAENKLVKMKSCDVVIVGSGCRGGDAAAVLASSGLKVLVLEKGEEGLGVNESFVYELCTDIVDAALHADVMKSVKYMVEHLVSKSRVLLYQGRHDLRDRVVQVEAWVKTMKWEGILEFLNAERKIWKVNGELSGYVQSWKTLTNVVVLGTGHLVPTEKAVNSQAMIEDWVLGRRTVLYFTVNE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi770g00011 238 Gene3D alpha/beta hydrolase 96 232 IPR029058 -
Gabi770g00011 238 Pfam Serine carboxypeptidase 100 226 IPR001563 GO:0004185|GO:0006508
Gabi770g00011 238 SUPERFAMILY FAD/NAD(P)-binding domain 60 105 IPR036188 -
Gabi770g00011 238 Gene3D - 37 95 IPR036188 -
Gabi770g00011 238 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 27 99 - -
Gabi770g00011 238 Pfam FAD binding domain 68 100 IPR003953 -
Gabi770g00011 238 SUPERFAMILY alpha/beta-Hydrolases 93 227 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi770g00011 Gabi-Chr770 112607 113833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi770g00011 124 228 Calmodulin-binding Proteins AT2G22960 24.528 2.92e-09 53.1