Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi766g00015 ATGGCGAGGATAAAGGTGTACGAGCTGAGGAACAAAACCAAGGCGGAGCTGCTGAACCAGCTGAAGGATCTGAAGGCGGAGCTAGCTCTGCTTCGAGTGGCCAAGGTCACCGGCGGCGCCCCTAACAAGCTTTCCAAGATCAAGGTGGTGAGGCTTTCGATAGCGCAGGTTTTGACGGTGATTTCGCAGAAGCAGAAAGCGGCGCTTAGAGAGGCTTATAAGAAGAAGAAGTATTTGCCCCTTGACCTTCGTCCCAAGAAGACCCGAGCCATTCGCAGACGCCTCACAAAAAACCAGGCATCACTGAAGACAGAACGGGAGAAGAAGGAGGAGTTGTACTTTCCACTAAGAAAGTTTGGATGCCAGCATTCCAATTTTGCCCAGGTACTTTTCAGTTTCAAATATTGCCTCTGTATACGACTTGTGCCTTCAGAGTTTCCAAGGATTATGTTAAATTCAGTGTTATTTCAAAAAAATCCTGGTTGA 486 0.4794 MARIKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKEELYFPLRKFGCQHSNFAQVLFSFKYCLCIRLVPSEFPRIMLNSVLFQKNPG 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi766g00015 161 FunFam 60S ribosomal protein L35 1 77 - -
Gabi766g00015 161 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gabi766g00015 161 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi766g00015 161 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gabi766g00015 161 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi766g00015 161 Coils Coil 7 34 - -
Gabi766g00015 161 FunFam 60S ribosomal protein L35 78 122 - -
Gabi766g00015 161 Coils Coil 92 112 - -
Gabi766g00015 161 Gene3D - 78 121 - -
Gabi766g00015 161 PANTHER 60S RIBOSOMAL PROTEIN L35 1 120 IPR045059 GO:0000463|GO:0022625
Gabi766g00015 161 NCBIfam 50S ribosomal protein L29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi766g00015 161 CDD Ribosomal_L29_HIP 8 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi766g00015 Gabi-Chr766 128088 129545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi766g00015 1 122 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 83.607 2.50e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi766g00015 K02918 - gmx:100789845 221.09