Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi766g00014 ATGGCGAGGATAAAGGTGTACGAGCTGAGGAACAAAACCAAGGCGGAGCTGCTGAACCAGCTGAAGGATCTGAAGGCGGAGCTAGCTCTGCTTCGAGTGGCCAAGGTCACCGGCGGCGCCCCTAACAAGCTTTCCAAGATCAAGGTGGTGAGGCTTTCGATAGCGCAGGTTTTGACGGTGATTTCGCAGAAGCAGAAAGCGGCGCTTAGAGAGGCTTATAAGAAGAAGAAGTATTTGCCCCTTGACCTTCGTCCCAAGAAGACCCGAGCCATTCGCAGACGCCTCACAAAAAACCAGGCATCACTGAAGACAGAACGGGAGAAGAAGGAGGAGTTGTACTTTCCACTAAGAAAGTTTGGATGCCAGCATTCCAATTTTGCCCAGGTGTGCATACTATCAGAGAGCTCTCTCGGGCCAATGATGTGA 426 0.5164 MARIKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKEELYFPLRKFGCQHSNFAQVCILSESSLGPMM 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi766g00014 141 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi766g00014 141 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi766g00014 141 PANTHER 60S RIBOSOMAL PROTEIN L35 1 120 IPR045059 GO:0000463|GO:0022625
Gabi766g00014 141 Gene3D - 78 121 - -
Gabi766g00014 141 NCBIfam 50S ribosomal protein L29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi766g00014 141 Coils Coil 7 34 - -
Gabi766g00014 141 FunFam 60S ribosomal protein L35 78 122 - -
Gabi766g00014 141 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gabi766g00014 141 Coils Coil 92 112 - -
Gabi766g00014 141 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gabi766g00014 141 CDD Ribosomal_L29_HIP 8 64 - -
Gabi766g00014 141 FunFam 60S ribosomal protein L35 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi766g00014 Gabi-Chr766 128088 135925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi766g00014 1 122 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 83.607 1.07e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi766g00014 K02918 - gmx:100778013 221.09