Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi766g00010 ATGGAGAAATCCCGTCACAACAAGTCCAACGCTGAACCCCGGAACCAACCTCTTCCTCGAGGGAACAAGCAGGTTCATAGACAGCAACAAATTCCGAATTTGTCTCCTGATTCTGTTTCTTGCGGTGGTGGGGTTGCAGAAAAAGATTCGTTCTCATTAAAATTCGGGTGGAGATCTTCTAAACAACGGTTTAAAACCCCCATTAAGAATTTATTAGCTGAAGAAATGTCACGTGAAACTGAATCCAAAAGAAGATCCCCAGGTGTTATTGCCAGGTTGATGGGTCTTGATGGGTTGCCGTTTCAGCAGCATGCTAATAAGCAGCATAAGGGTTCGTCAGAAAACTTTCTAACGAGGACAACACAATTAGAGAAAACTCGAAGCAGAGGAACACCATATGATGGTAGATCGTCTAGCAGAAGCTCAAAGGATCAGCAGGAATTTAAGGATGTATTTGAGGTCTCGGAGGTCCCTAAGGTAGAGAGCAGTAGGTATTCATTGCAGGGGTCTGCAGACATGAAGATCACTGATGCTGAAATGTCTTTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTTACCAGGATTTGCAGTCTTCAAAGGATTTCTGTGACACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGTTAAAATACTTTAAGCGGCCAGATTCTCTGTTTAAAAAGCATCTAAATGATCTTCAAGATACCCCCCTCCAATCGCATTTTGGTCATGAAGAAGTTATGAATATTGAGAAGCATGAACAGGACCTCAATTGGAGGTCAGATAGGGAGACTCCACTGTTGAATTACAATAGATCTCATCAGAAGCATCATGATGGTTATCCTTGCCGTTTTGACAAAAGACATGTGATGCATAGTTCACCAAAATCATCTAAGCTTCAGTTTAGAGGTAGTCATGAACAAGATGCAGCACCTACAAAGATTGTTGTCCTAAAACCCAATTTTGGAAAAATGCAGAATGATACCAGAATTGTTTCATCACCTTTTTCTTCACATAATTTTCTGTCAGAGTGCGGAAATGACACTGAATTTTCAGATGTCAGATTTAGGGACACTGAACTGTATCAAAGGACAAATTTGCCTGATAGTGCCAGGTCTTCGAGGCACAATTCTTTGGAATCTAGAGAAATGGCAAAGGAAATCACTAGGCAAATGAAAAATAGTTTGAACAATGGTTGCACGATGTTCTCCCCTTCTAGATTTAGAGGATATGCTGGGGATGATAGTTCATCTAGTGTTTCTGGGAATGAATCTCCAGAGGAAACAACTGCAACTTTGGGAAACTCATTTGACTTAAATAACCGTTGCCGGCGGTCACCCCATTCTAGTGAATCATCTGTTAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGACGCACAAATCTCAAGAGGTCCAAGTCATCAGCAGGAGCAACACGCTAGCTGAAATGCTTGCTGTCCCTGATAAGGAAATGAAGGCTGCAAATTTTGACAGCATGGCTAGTAGGGAAGGTTTCCGTAATAAGTTTGATCGCCATGGTGAACCTGCCGGGTGGGTTGAGCCATTTGGTATCAGCAGCAAGGATGGTTGGAAGGACGGATGTATTGGAAGTTTGTCCAGGTCAAAATCTCTTCCTGCTTCATCTACTGCCTTTGGAAGTCCAAGGACATTCTTGCGTACTGAAGCACTTCGTGATGATCGATTTATGGTTCCAAAGGAAGCCCTTAAACGGGAGAGGAAAAGAGCAACAAAGAGTCTTGACCATAGACATGGTGTGAATACTAAAAGCACAAAATCTGGTCACAAGTCTTGGTCTTTGCATTCATCAAAGCTCGAAAGTAATGAGTTTTCTCCAGAATTAAATACAATTCAGAATAAAATGAAGATCAATCTTGAAGAAGATTCACCCAAGCTAGAGGTTCTGCCCACTGAATCCTTTGCCGGGACCTGCAGAGATACAATTGCAGTTACTGATGATGTTGTAAATGTGGCAAATGAATATGCAGTTGTGTCTTCTGAATCTTCTTCTGATAAGGAACTATCAGTTGGGTCTTCTAATGGAAATTCAGTCTTCTTTGAACCACCTGCACCTGAACTTGAATCTTCGTGCTGTAAAGATGCTGATCAACCCAGTCCAGTCTCAGTCCTAGAACCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAGTGCTGACCTACAAGGACTGCGAATGCAACTCAAGTTGCTAAAGTTGGAATCTGAAGAATATGTGGAGGGACCCATGCTAATTTCAAGTGATGAAGAAGGAGGGGAAACATCTACTAGAATGTCAGAAGACAATGGATTATGTAGAATTGAAGATAGTTGGGAGTCTTCCTACATTTTTGATGTCTTGTCTAAATCATGCATTGATGGAGCTCAGCCCGATACAATGTTGGAAGTTTGGCATTCTCTAGAATGCCCTGTGAGTCTATCGGTGTTTGATGAGCTTGAAAAGAGGTACTGTGATTGGACTACTTGTTCAAGGTCTGAAAGGAGATTGCTTTTTGACCGTATAAATTCAGGAATCGTCAAGATCCATGAGCAATCCACGTTTGCACAACCATGGGTGAGCCCTGCAACCACAAATATTGGTTCTAAATTGATTAAAAATGGGCTTCAAGATGGTCTTTATATGATGCTAAAGAGCCAAGGAAAAGTAAAGGATGACGCTCTGGGGAAGGTGCTGGATAAGGAATCGCAGTGGTTGTGTTTAAGAGATGACATTGATGTAATAGGGAGGGAAGTTGAGAGATTATTATTAGATGATCTAGTTGCAGAGATAGCCGGTACCTAG 2856 0.4167 MEKSRHNKSNAEPRNQPLPRGNKQVHRQQQIPNLSPDSVSCGGGVAEKDSFSLKFGWRSSKQRFKTPIKNLLAEEMSRETESKRRSPGVIARLMGLDGLPFQQHANKQHKGSSENFLTRTTQLEKTRSRGTPYDGRSSSRSSKDQQEFKDVFEVSEVPKVESSRYSLQGSADMKITDAEMSFIEQKFMDAKRLATYQDLQSSKDFCDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQDTPLQSHFGHEEVMNIEKHEQDLNWRSDRETPLLNYNRSHQKHHDGYPCRFDKRHVMHSSPKSSKLQFRGSHEQDAAPTKIVVLKPNFGKMQNDTRIVSSPFSSHNFLSECGNDTEFSDVRFRDTELYQRTNLPDSARSSRHNSLESREMAKEITRQMKNSLNNGCTMFSPSRFRGYAGDDSSSSVSGNESPEETTATLGNSFDLNNRCRRSPHSSESSVSREAKKRLSERWKMTHKSQEVQVISRSNTLAEMLAVPDKEMKAANFDSMASREGFRNKFDRHGEPAGWVEPFGISSKDGWKDGCIGSLSRSKSLPASSTAFGSPRTFLRTEALRDDRFMVPKEALKRERKRATKSLDHRHGVNTKSTKSGHKSWSLHSSKLESNEFSPELNTIQNKMKINLEEDSPKLEVLPTESFAGTCRDTIAVTDDVVNVANEYAVVSSESSSDKELSVGSSNGNSVFFEPPAPELESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSADLQGLRMQLKLLKLESEEYVEGPMLISSDEEGGETSTRMSEDNGLCRIEDSWESSYIFDVLSKSCIDGAQPDTMLEVWHSLECPVSLSVFDELEKRYCDWTTCSRSERRLLFDRINSGIVKIHEQSTFAQPWVSPATTNIGSKLIKNGLQDGLYMMLKSQGKVKDDALGKVLDKESQWLCLRDDIDVIGREVERLLLDDLVAEIAGT 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi766g00010 951 Pfam Protein of unknown function (DUF3741) 184 228 IPR022212 -
Gabi766g00010 951 Pfam Domain of unknown function (DUF4378) 798 947 IPR025486 -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 584 618 - -
Gabi766g00010 951 Pfam DUF761-associated sequence motif 80 103 IPR032795 -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 105 148 - -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 415 452 - -
Gabi766g00010 951 Coils Coil 739 759 - -
Gabi766g00010 951 PANTHER AFADIN 21 949 - -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 453 472 - -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 11 37 - -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 1 45 - -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 584 602 - -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 105 139 - -
Gabi766g00010 951 MobiDBLite consensus disorder prediction 411 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi766g00010 Gabi-Chr766 102453 108790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi766g00010 61 949 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 39.502 2.68e-156 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi766g00010 - - ccaj:109788117 1357.04