Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi763g00015 ATGGCTTTTTGCCCAATCTTTTGTTGTGGAAATGCTTCGGATCGCAAAGGACGAGGGAAGAAACAACCTCCATGGAGGGTGTTTTCTTTGAAGGAGTTACACTCGGCTACAAATAATTTCAACTATGATAACAAGCTTGGTGAAGGGGGATTCGGTAGTGTGTACTGGGGCCAGCTTTGGGATGGATCGCAAATTGCAGTGAAAAGATTGAAGGTCTGGAGCAGCAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTACGTGGTTATTGTGCTGAAGGTCAGGAACGGTTAATCGTGTATGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCATGGACAGCACTCAACAGAATGCCTTCTTGATTGGAATCGGCGGATGAATATTGCAATCGGTTCTGCTGAGGGAATCGCATATCTTCACCACCAAGCAACGCCACATATCATCCACAGAGATGTTAAAGCAAGCAATGTATTGTTGGATTCAGATTTCCAGGCACAGGTTGCTGATTTTGGTTTTGCCAAGTTGATCCCTGATGGGGCAACACATGTGACTACAAGAGTTAAGGGCACCCTTGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCCTTCTAGAACTTGCTAGTGGCAAAAAACCACTTGAAAAACTTAGTAATGCAGCGAAACGATCAATAAATGATTGGGCACTGCCATTGGCATGTGAGAAGAAATTTAGTGAACTTGCTGATCCAAGACTTAATGGCAACTATGTGGAGCAAGAGCTTAAAATAGTTATTTTAGTTGCTCTCATGTGTGCTCAGAGTCAGCCTGAGAAGAGACCAACCATGCTTGAGGTGTTAGAGCTACTTAAGGGAGAATCCAAAGATAAGCTTTCTCAGTTGGAGAATTATGAACTCTTTAGAAACCCTCCAGCTGTAGGACATGATGATGGGACATCAGCTGCTGAAGGAAATTCAGATTTCATCTCAGAAGAAAAGGAACCAAAACATGAGTTGGAAGAGAATACAAGGCCATGA 1101 0.4269 MAFCPIFCCGNASDRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSSKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTECLLDWNRRMNIAIGSAEGIAYLHHQATPHIIHRDVKASNVLLDSDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSNAAKRSINDWALPLACEKKFSELADPRLNGNYVEQELKIVILVALMCAQSQPEKRPTMLEVLELLKGESKDKLSQLENYELFRNPPAVGHDDGTSAAEGNSDFISEEKEPKHELEENTRP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi763g00015 366 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Gabi763g00015 366 MobiDBLite consensus disorder prediction 348 366 - -
Gabi763g00015 366 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Gabi763g00015 366 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Gabi763g00015 366 MobiDBLite consensus disorder prediction 329 366 - -
Gabi763g00015 366 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi763g00015 366 PANTHER OS01G0253100 PROTEIN 21 317 - -
Gabi763g00015 366 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi763g00015 366 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Gabi763g00015 366 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Gabi763g00015 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Gabi763g00015 366 Pfam Protein kinase domain 41 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi763g00015 366 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi763g00015 Gabi-Chr763 107095 110225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi763g00015 28 314 Trihelix Transcription Factor Family AT1G70460 51.203 3.17e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gabi763g00015 Pkinase 6.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi763g00015 - - gmx:100788153 684.1