Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi763g00002 ATGGCCGTTGTATCCCTCTCTGTGCTCACAGTCACACCTTCTTCCACTTGTTCTTGCTTCAATGGCGGGATCCATCTCCGTTCCCACAAGAGCTTCATTTCAATCCACTCTCCTTCTCCTTTTTCGTCTTTTACCTCAAATTCAAAGCTCTCTGGCAGTGGCAAGCAGCGCTCTCGCACCACCACCACCGTCCTTGCTGCTTCCGCCGACTATTATTCTACTCTCGGAATCCCCAAATCCGCCACCGGCAAGGAAATCAAAGCGGCTTATCGAAGGTTAGCTCGTCAGTACCATCCTGATGTTAACAAGGAACCTGGAGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCGTATGAGGTGTTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATATGGAGAGGCAGGAGTTAAGAGTACAGTTGGAGGAGCATCAAGTGCCTATACGACAAATCCATTTGATTTATTTGAGACATTTTTTGGGCCAAGTATGGGTGGCTTTGCTGGCATGGATCCAGCTGGATTTGGAACACAACGCCGTAGTACTGTAACTAAGGGTGAAGACATCCGGTATGATTTTTCCTTGGACTTTTCTGAGGCAATTTTTGGAACGGAGAAAGAATTTGAGCTTTCCCATCTGGAAACATGTGAAGTCTGTACTGGTACTGGAGCAAAGATAGGCTCCAAGTTGAGAGTATGTTCCACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGGTTGTTCTCCCAGGTTTCAGTATGTCCAAACTGTGGAGGGGATGGTGAAGTCATATCTGAATATTGTCGTAAATGTAGTGGCGAAGGACGAATACGGGTTAAGAAAAATATTAAAGTTAGAGTTCCTCCTGGGGTAAGCTCGGGCAGTATTCTGAGAGTTGCTGGGGAGGGTGATGCTGGACCCCGAGGTAGGGGCCCTCCAGGAGATCTTTATGTATATCTTGATGTGGAAGAGATACCAGGAATTCAAAGGGATGACATTAATCTCCGCTCAACAATATCAATCAGTTATCTAGATGCTATACTTGGGGCTGTCGTGAAGGTTAAGACAGTTGAAGGCATTTCTGAACTACAAATACCTCCCGGTACCCAACCTGGAGATGTCCTTGTCCTTGCAAGGAAAGGTGTACCAAAATTAAACAAACCATCAATACGTGGCGACCACTTATTTACGGTTAAAGTTACAATACCAAAACGTATTAGTAAACAGGAGCGTGACGTACTTGAAGAACTTGCTTCTCTAGGTGACACAACGAGCAGTCGTTCAAAATCTCGTCCTAGGACTCACTCTTCCCCAGGAAGTACAGAAGGTCCTGCAACTCAAAGGGCTGAAAGTCCAACAGCAGCAAAAGTTGCAGAAAAAACGGAACAATCGGAAGACCAAAACGATATATGGAATAGATTAAAGGACTTTGCTGGGTCTGTGGCAAATGGAGCGCTTAAGTGGCTGAAAGATAATCTCTAG 1500 0.4533 MAVVSLSVLTVTPSSTCSCFNGGIHLRSHKSFISIHSPSPFSSFTSNSKLSGSGKQRSRTTTTVLAASADYYSTLGIPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGASSAYTTNPFDLFETFFGPSMGGFAGMDPAGFGTQRRSTVTKGEDIRYDFSLDFSEAIFGTEKEFELSHLETCEVCTGTGAKIGSKLRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCRKCSGEGRIRVKKNIKVRVPPGVSSGSILRVAGEGDAGPRGRGPPGDLYVYLDVEEIPGIQRDDINLRSTISISYLDAILGAVVKVKTVEGISELQIPPGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISKQERDVLEELASLGDTTSSRSKSRPRTHSSPGSTEGPATQRAESPTAAKVAEKTEQSEDQNDIWNRLKDFAGSVANGALKWLKDNL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi763g00002 499 Gene3D - 187 324 - -
Gabi763g00002 499 Pfam DnaJ central domain 217 281 IPR001305 GO:0031072|GO:0051082
Gabi763g00002 499 Pfam DnaJ C terminal domain 190 409 IPR002939 -
Gabi763g00002 499 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 420 IPR008971 GO:0006457|GO:0051082
Gabi763g00002 499 FunFam Chaperone protein dnaJ A6 chloroplastic 67 173 - -
Gabi763g00002 499 NCBIfam molecular chaperone DnaJ 70 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gabi763g00002 499 FunFam Molecular chaperone Hsp40/DnaJ family protein 334 426 - -
Gabi763g00002 499 SUPERFAMILY Chaperone J-domain 66 175 IPR036869 -
Gabi763g00002 499 CDD DnaJ 70 123 IPR001623 -
Gabi763g00002 499 PRINTS DnaJ domain signature 72 90 IPR001623 -
Gabi763g00002 499 PRINTS DnaJ domain signature 90 105 IPR001623 -
Gabi763g00002 499 PRINTS DnaJ domain signature 106 126 IPR001623 -
Gabi763g00002 499 PRINTS DnaJ domain signature 126 145 IPR001623 -
Gabi763g00002 499 FunFam Chaperone protein dnaJ A6 chloroplastic 217 281 - -
Gabi763g00002 499 Gene3D - 217 281 - -
Gabi763g00002 499 MobiDBLite consensus disorder prediction 425 454 - -
Gabi763g00002 499 Pfam DnaJ domain 70 131 IPR001623 -
Gabi763g00002 499 MobiDBLite consensus disorder prediction 424 475 - -
Gabi763g00002 499 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 204 284 IPR036410 -
Gabi763g00002 499 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 339 IPR008971 GO:0006457|GO:0051082
Gabi763g00002 499 CDD DnaJ_C 188 412 - -
Gabi763g00002 499 CDD DnaJ_zf 217 281 IPR001305 GO:0031072|GO:0051082
Gabi763g00002 499 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 40 436 - -
Gabi763g00002 499 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Gabi763g00002 499 Gene3D DnaJ domain 67 172 IPR036869 -
Gabi763g00002 499 Gene3D - 334 426 - -
Gabi763g00002 499 ProSiteProfiles Zinc finger CR-type profile. 204 286 IPR001305 GO:0031072|GO:0051082
Gabi763g00002 499 Hamap Chaperone protein DnaJ [dnaJ]. 67 483 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gabi763g00002 499 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Gabi763g00002 499 SMART dnaj_3 69 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi763g00002 Gabi-Chr763 37419 45007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi763g00002 71 133 C2H2 Transcription Factor Family AT1G74250 49.275 1.14e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi763g00002 K03686 - gmx:100798567 783.097