Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi761g00010 ATGGATGCCCCGATTTCTCCCATCACCCACCTCTTACCTCAACCCGATCTTTATCTTCACACTTCCAGTGGGACACGCATTCCAGTCCACGCAAGCATTTTGGCTTCGGCGTCACCTGTTCTAGAGAACGTCATAATGTCCAACAGAATCGTTAAAATCAACGGCGTTCCACACGACGCCGTCACCGCATTCTTGAGCTTCCTCTACTCCTCCAGGTGCAGCGAGGAGGAGATGGACAATCACGGAATGCACCTTCTTGCACTATCGCACGTGTATTTGGTGCGGCAGCTGAAGCAGAGTTGCATCAAGGGGCTGGCACAACGCGTGACCACAGAGAACGTGGTGGACGTGTTGCAACTGGCGAGACTCTGCGATGCACCGGATCTCTACCTCAAGTGCGTCAAGCTTCTAATCAATAATTTCAAAACCGTGGAGCAAACAGAGGGTTGGAAATTCTTGCAGAAACATGACCCCTGGCTCGAGCTCGACGTTCTTCGCTTCATGGACGAACAAGAATCGAGGAAGAAGAAATCAAAGAGGCGAAGGGAGGAGCAGAGGTTGTATGTGCAGCTGAGCGAGGCCATGGATTGTTTGGAACACATATGCACGGAAGGGTGCACCCACGTGGGTCCATACGATGTTGAACTTAAGCAAGAGAAGAGACCCTGTTCCAAATTCTCCACGTGTCAAGGTCTGCAAGTGTTGATTCGACACGTGGCAACTTGTAAGAGCAGGCTCAACCGAGGTTGCTTGCGGTGTAAGCGCATGTGGCAACTCTTCAGACTCCACTCCTCCATTTGCCTTCACCAAGATTCCTGCAAGGTTCCTCTTTGCAGGCAAATTCAATTGAAAATGCAGCAAGAAAACAGGAAAGATGATGCAAAGTGGAAAGTACTAGTGAGGAAGGTGGCCACGGCCAAAGCCATGTCTTCCTTGGCAATGCCGAAAAGGAACAAGGAAAGAGAGTTGCGACTAGGAAAGGGGGGAGAGGGGATGACTCTGGTGTCTGCATTTTTTTTATTCTCAAAGAGATTACGATGA 1041 0.5005 MDAPISPITHLLPQPDLYLHTSSGTRIPVHASILASASPVLENVIMSNRIVKINGVPHDAVTAFLSFLYSSRCSEEEMDNHGMHLLALSHVYLVRQLKQSCIKGLAQRVTTENVVDVLQLARLCDAPDLYLKCVKLLINNFKTVEQTEGWKFLQKHDPWLELDVLRFMDEQESRKKKSKRRREEQRLYVQLSEAMDCLEHICTEGCTHVGPYDVELKQEKRPCSKFSTCQGLQVLIRHVATCKSRLNRGCLRCKRMWQLFRLHSSICLHQDSCKVPLCRQIQLKMQQENRKDDAKWKVLVRKVATAKAMSSLAMPKRNKERELRLGKGGEGMTLVSAFFLFSKRLR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi761g00010 346 ProSiteProfiles BTB domain profile. 15 77 IPR000210 GO:0005515
Gabi761g00010 346 SMART TAZ_2 185 279 IPR000197 -
Gabi761g00010 346 Gene3D Potassium Channel Kv1.1; Chain A 14 104 IPR011333 -
Gabi761g00010 346 Pfam BTB/POZ domain 15 107 IPR000210 GO:0005515
Gabi761g00010 346 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 14 321 IPR044513 -
Gabi761g00010 346 Pfam TAZ zinc finger 192 278 IPR000197 -
Gabi761g00010 346 FunFam BTB/POZ and TAZ domain-containing protein 2 181 307 - -
Gabi761g00010 346 SMART BTB_4 15 109 IPR000210 GO:0005515
Gabi761g00010 346 Gene3D - 109 181 - -
Gabi761g00010 346 SUPERFAMILY POZ domain 16 139 IPR011333 -
Gabi761g00010 346 FunFam BTB/POZ and TAZ domain-containing protein 2 110 180 - -
Gabi761g00010 346 Gene3D TAZ domain 182 289 IPR035898 -
Gabi761g00010 346 CDD BACK 110 153 - -
Gabi761g00010 346 SUPERFAMILY TAZ domain 183 282 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi761g00010 Gabi-Chr761 80145 85417 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gabi761g00010 BTB 4.4e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi761g00010 - - gmx:100813611 502.286