Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi761g00002 ATGGCAGGGAGAAAAACCCATCTCTTGTTTCTCTTTTCATTCTTCTATCTCTTCTTCTCCATCCATGCCAAGCTTGATCTCCACCCTTCAGACCTCAAAGCTCTCATAACTCTCCAAAAGGACCTCGGAGTCAACGGTCAACCCTCCACCATGATTCACCCGTGTAACACGGAGGGCGTGTTCTGTGAGAGGAGGCTTTCCAACAATGAAAGCTATGTCCTCAGAATCACAAGGCTTGTGTTGAAGTCGAAAAACCTTAATGGGGTTTTGTCACCTACCATAGGACGCCTCACAGAGCTTAAAGAACTCTCTCTTTCAAACAACAAGCTCGTTGACCGAATCCCACAACAAATAGTTGACTGCAGAAAGCTTGAGATTTTGGACCTTGGAAGCAACCTCTTCTCTGGTGAAGTCCCTTCTGAATTGTCCTCACTCATTCGTCTTCGCGTCCTTGATGTCTCTTCCAATAAGCTCTCTGGGAACTTGAATTTCCTCAAGTATTTTCCCAACTTGGAAACTCTCTCTGTTGCTGATAACCTCTTCACTGGAAGAGTTCCATCATCTATGCGTTCTTTTCGCAATCTCAGACACTTTGACTTCTCTGGGAACCGTTTCCTTGAAGGTTCTCTACCATTGAACCAAAGGCTTGAACAATCAGCATCAGATAGTGTTCCCAAAAGATACATCTTTGCTGAGAGTTCAAACAATTCCTCAAGCCGCAAGAATCATTCAATTGCAGCTCCTGGACCTGCAGCTCCTGGACCTGGTCCTTCAGCTGCAGTTTCTCACCACAAGCACAAGTCAAGTAAGAGAAAACTAGCTGGGTGGATTCTTGGGTTTTTGGCTGGGGCAATGGCTGGGACCTTATCTGGGTTGATATTTTCTTTGTTGTTTAAGTTGGCTTTGGCTTTGATAAAGGGTGGAGGGAAGGGTTCTGGACCTGCAATTTATAGTCCCTTTATTAAAAGGGGAGAGGACTTGGCTTTCTTGGAGAAAGAAGATGGGCTTGCTGCAATGGAAGTCATTGGAAGAGGAGGGTGTGGTGAGGTTTACAAGGCTGAATTACCAGGAAGTAATGGCAAAATGATTGCCATAAAGAAGATTGTTCAGCCTCCAAAGGATGCTGCTGAGTTGGCTGATGAAGATAGTAAGCTTTTGCATAAGAAAATGCGCCAAATTAAGTCAGAGATTAACACAGTTGGTCAAATTAGACACCGGAACCTTCTGCCTCTTCTGGCTCATGTGTCTAGGCCTGATTGTCACTACCTTGTCTATGAATTCATGAAGAATGGGAGTTTACAAGATGTGTTGAATAAAGTTGAAAGGGGTGAAATGGAGTTGGATTGGTTGGCAAGGCACAAGATTGCACTTGGTGTAGCAGCTGGCCTTGAATATCTTCACATGAACCATAGCCCTCGTATCATTCATAGAGATCTCAAGCCTGCAAACATTCTTCTTGATGATGATATGGAAGCTCGCATAGCAGATTTTGGACTTGCAAAGGCTATGCCAGATGCTCAAACACACATCACAACTTCAAATGTTGCTGGCACTGTGGGATATATAGCACCAGAGTATCACCAGATACTCAAGTTCACTGACAAGTGTGACATATACAGCTTTGGGGTTATGCTTGGTGTCTTGGTGATAGGAAAGCTTCCATCAGATGATTTTTTCCAGCACACAGACGAAATGAGTTTGGTAAAGTGGATGAGAAATGTGATGACTTCAGAAAATCCTAAGGAGGCTATTGATCCAAGGCTTTTAGGTAATGGATATGAGGAACAAATGCTTCTGGTTTTGAAGATTGCATGCTTTTGCACTATGGATGATCCAAAGGAGAGGCCTAACAGTAAGGATGTTAGGTGTATGTTGGCCCAAATCAAGCACTGA 1893 0.4385 MAGRKTHLLFLFSFFYLFFSIHAKLDLHPSDLKALITLQKDLGVNGQPSTMIHPCNTEGVFCERRLSNNESYVLRITRLVLKSKNLNGVLSPTIGRLTELKELSLSNNKLVDRIPQQIVDCRKLEILDLGSNLFSGEVPSELSSLIRLRVLDVSSNKLSGNLNFLKYFPNLETLSVADNLFTGRVPSSMRSFRNLRHFDFSGNRFLEGSLPLNQRLEQSASDSVPKRYIFAESSNNSSSRKNHSIAAPGPAAPGPGPSAAVSHHKHKSSKRKLAGWILGFLAGAMAGTLSGLIFSLLFKLALALIKGGGKGSGPAIYSPFIKRGEDLAFLEKEDGLAAMEVIGRGGCGEVYKAELPGSNGKMIAIKKIVQPPKDAAELADEDSKLLHKKMRQIKSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDVLNKVERGEMELDWLARHKIALGVAAGLEYLHMNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVMLGVLVIGKLPSDDFFQHTDEMSLVKWMRNVMTSENPKEAIDPRLLGNGYEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLAQIKH 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi761g00002 630 ProSiteProfiles Protein kinase domain profile. 336 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi761g00002 630 FunFam Leucine-rich repeat receptor-like protein kinase 428 630 - -
Gabi761g00002 630 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 323 427 - -
Gabi761g00002 630 SUPERFAMILY Protein kinase-like (PK-like) 332 625 IPR011009 -
Gabi761g00002 630 Gene3D Ribonuclease Inhibitor 31 143 IPR032675 -
Gabi761g00002 630 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Gabi761g00002 630 SUPERFAMILY RNI-like 74 208 - -
Gabi761g00002 630 MobiDBLite consensus disorder prediction 234 265 - -
Gabi761g00002 630 Gene3D Transferase(Phosphotransferase) domain 1 428 629 - -
Gabi761g00002 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 63 629 - -
Gabi761g00002 630 Gene3D Phosphorylase Kinase; domain 1 328 427 - -
Gabi761g00002 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Gabi761g00002 630 Pfam Protein kinase domain 339 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi761g00002 630 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 71 162 - -
Gabi761g00002 630 Gene3D Ribonuclease Inhibitor 144 222 IPR032675 -
Gabi761g00002 630 SMART serkin_6 336 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi761g00002 Gabi-Chr761 42018 44252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi761g00002 8 630 Receptor kinase-like Gene Family AT2G31880 65.024 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Gabi761g00002 Pkinase 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi761g00002 - - gmx:100811980 945.651