Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi75g00011 ATGATGATGGATCAGCGACAGCGAGAGAAGCTGCTTCAGAAAACCGAGGCCTGTGGTTTAATGGCAGGTGTTGGGGCTGAGCTTGGCTTTGTCACCGTGACAGGAGACAACAACAAGATAACTCATGGGTCGGGTCGGATGACTCGGATCCATGATCATAACAACCACCTTGGCCTTGCTGCTGCTGTTGCCACCTTTGGAAATGTTCACAGGAAGAAAAGGATGGCCAGGCAGAGAAGGACCACCACCACCACCACTGCAATGCAGGTCAACCATTTCCCTTCCAAGCACACTACACTAGCTCCTGCTCCTTCTACCTCCACGCACGTGCCACTCTCCCCACTTCCATCTTATAATCCTTCCCCATCTCTCCCAGCCGCACGTGAAATCGATCCTAAAAGGTTGAGATTCCTTTTCCAAAAGGAGCTGAAAAACAGTGACGTTAGCTCCCTTAGGAGAATGATATTACCAAAGAAAGCAGCAGAAGCTTACCTTCCTGCCCTTGAATCAAAGGAAGGAATTCTTATGACCATGGATGATCTAGATGGTCTTCATGTATGGAGTTTCAAGTACAGGTTTTGGCCTAATAACAACAGTCGGATGTATGTACTTGAAAATACTGGAGACTTTGTTAACACACATGGCCTACGCCTTGGAGATTCCATTTTGGTTTACCAGGATAGTGAAAACCATAATTATGTTATTCAGGCCAAGAAGGCTTCTGATCAGGATGAATTTATGGAAGAAACTAGTAATACCATCAATGATATCTTCCTTAATGATTATGAGGTGAACAAACCTGGTTGCTTCAATGTAACCTATCCTGCAATGAACGATACGGGCATGTCATTCATATATGAGACAAACTTCTCAAATGACTCTCCACTTGATTTTTTGGGTGGATCAATGACCAATTTTTCAAGGATTGGGCCAGTTGAAACCTTTGGCTCGGTTGAGAATTTGTCACTTGACGACTTCTATTAA 984 0.4441 MMMDQRQREKLLQKTEACGLMAGVGAELGFVTVTGDNNKITHGSGRMTRIHDHNNHLGLAAAVATFGNVHRKKRMARQRRTTTTTTAMQVNHFPSKHTTLAPAPSTSTHVPLSPLPSYNPSPSLPAAREIDPKRLRFLFQKELKNSDVSSLRRMILPKKAAEAYLPALESKEGILMTMDDLDGLHVWSFKYRFWPNNNSRMYVLENTGDFVNTHGLRLGDSILVYQDSENHNYVIQAKKASDQDEFMEETSNTINDIFLNDYEVNKPGCFNVTYPAMNDTGMSFIYETNFSNDSPLDFLGGSMTNFSRIGPVETFGSVENLSLDDFY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi75g00011 327 CDD B3_DNA 137 239 IPR003340 GO:0003677
Gabi75g00011 327 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 70 249 IPR044800 GO:0003700
Gabi75g00011 327 SMART B3_2 139 241 IPR003340 GO:0003677
Gabi75g00011 327 Gene3D - 135 254 IPR015300 -
Gabi75g00011 327 ProSiteProfiles B3 DNA-binding domain profile. 139 241 IPR003340 GO:0003677
Gabi75g00011 327 FunFam B3 domain-containing transcription factor FUS3 135 250 - -
Gabi75g00011 327 Pfam B3 DNA binding domain 139 237 IPR003340 GO:0003677
Gabi75g00011 327 SUPERFAMILY DNA-binding pseudobarrel domain 137 236 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi75g00011 Gabi-Chr75 125060 128147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi75g00011 40 327 B3 DNA Binding Superfamily AT3G26790 50.000 9.80e-90 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gabi75g00011 B3 1.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi75g00011 K09287 - gmx:100783961 469.544