Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi759g00023 ATGCTCACAAGAAGAAAATTCCTGAACTTGTTCTCAACTACCAACGTTTCTCAAATAATTTGTCACCAACTTAATGCAGTTCCAAAGCCATTGCACCCTTTTTCTGAAATCCCCAAAAGGTTTAGGGTTTTACTATTTTATGGAACGCAAGCATCGAAATTTCCGGAATACGAGATGCCATCTGTGACGTGGGGCGTGATTCAGGGTCGCAAGGAGAAGCTGGTTTCTCGGGTAATCGTCTTCGACTACCTCAAGGGTTTGGGAATCATCCCTGATGAGTTGCAGGACTTGGAGCTTCCTTCCACCGTTGATGTCATGAGGGAGCGCGTCGAGTTTCTTCAGAAGTTGGGTTTAACCATTGATGACATCAACAACTACCCTTTGATGCTAGGATGCAGTGTAAGAAAGAACATTATTCCTGTGTTGGGGTACTTGGAAAAAATTGGGATTCCAAGGTCTAAACTTGGTGAATTCGTTAAGAATTATCCACAAGTGTTGCATGCTAGTGTCATTGTTGAGCTTGCTCCTGTTATCAAGTTCCTTAGGGGGCTTGATGTGGAGAGGGATGATATTGGGTATGTGTTGCAAAAGTATCCTGAACTTCTTGGGTTCAAGCTTGAGGGTACTATGAGCACTTCAGTGGCTTATCTTGTTAGTATTGGTGTTAACCCTAGAGATATTGGTCCAATGGTAACACAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTATGATAAAGCCTCTGATTGATTACTTGCTCGTTTTGGGGCTGCCAAAGAAGATTTTAGCTAGGATGTTGGAGAAGCGAGCCTATATACTTGGGTATGATTTTGAAGAGACTGTGAAACCAAATGTGGATTGTTTGATCAGTTTTGGTATAAGGAGAGAATGTCTGCCTTCGGTTATTGCTCAATATCCGCAGATTATTGGGCTGCCTCTTAAGGCTAAATTGTCTTCTCAGCAGTACTTTTTTAGTTTGAAGCTTAAGATTGATCCGGAAGGGTTTGCACGAGTGGTGGAGAAGATGCCACAGGTGGTTAGCCTTAACCAACATGTGATTATGAAGCCAGTTGAGTTCCTCCTTGGGAGGGGAATACCGTCCCCTGATGTGGCTAGCATGGTGATCAAGTGTCCTCAGTTAGTAGCACTGCGACTTGAGTTCATGAAGAACAGTTATTACTTCTTCAAGAGTGAGATGGGGAGACCCATAAAAGAGCTTGTGGATTTCCCAGAATATTTTACTTATAGTTTGGAATCCAGGATCAAACCCAGATACCAGCGGCTAAAGAGCAAGGGGATAAGGTGTTCATTGAATTGGATGCTAAATTGTAGTGACCAGAGATTTGAGGAGAGATTGCAGGGTAATTACATTGAAACTGAAAGTATAGGTCCGTCATTCTGTTTGGGTGGGAAACTAGAGTTGCCAGGGAATGCTGTAGTGTCAGATGAGGAAGAGGAGAGTGATGATGAACTACTATACAGACAAACTGTTTCTCTTTAA 1503 0.4271 MLTRRKFLNLFSTTNVSQIICHQLNAVPKPLHPFSEIPKRFRVLLFYGTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIVFDYLKGLGIIPDELQDLELPSTVDVMRERVEFLQKLGLTIDDINNYPLMLGCSVRKNIIPVLGYLEKIGIPRSKLGEFVKNYPQVLHASVIVELAPVIKFLRGLDVERDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLIDYLLVLGLPKKILARMLEKRAYILGYDFEETVKPNVDCLISFGIRRECLPSVIAQYPQIIGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLNQHVIMKPVEFLLGRGIPSPDVASMVIKCPQLVALRLEFMKNSYYFFKSEMGRPIKELVDFPEYFTYSLESRIKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGNYIETESIGPSFCLGGKLELPGNAVVSDEEEESDDELLYRQTVSL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi759g00023 500 Coils Coil 498 500 - -
Gabi759g00023 500 FunFam Transcription termination factor MTERF4, chloroplastic 244 458 - -
Gabi759g00023 500 Gene3D Transcription termination factor 3, mitochondrial 105 246 IPR038538 -
Gabi759g00023 500 Gene3D Transcription termination factor 3, mitochondrial 247 460 IPR038538 -
Gabi759g00023 500 Pfam mTERF 142 450 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 PANTHER CGI-12 PROTEIN-RELATED 141 273 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 FunFam Transcription termination factor mterf4, chloroplastic 106 243 - -
Gabi759g00023 500 SMART mt_12 404 435 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 300 332 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 372 403 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 192 223 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 120 151 IPR003690 GO:0003690|GO:0006355
Gabi759g00023 500 SMART mt_12 337 367 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi759g00023 Gabi-Chr759 143478 145204 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi759g00023 mTERF 9.6e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi759g00023 K15031 - gmx:100809590 845.884