Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi757g00004 ATGGTTTCCATCTCCGAAATTATGTTACCACTCTCTATGTTCTTAACCATACTTTTGGCTTCAAAGTTCAAGGCTGGTGAGAGTGGATTTTTTACTGACAATGTGAAAGTTATAATCACCAACAAATTAACTAATATGCAGCTCGGTGTTCATTGCAAAGACAAGACTCATGATCTTGGGTTTCAAGCATTGCAGATTGGGCAATCATACAGTTTCCAGGTTACGATTAATTTCAGAAAGAATAAGCTGTACTTTTGCAGCTTTAATTGGATAACAGATTCTCACTATTTTGACATTTATGATCAATTTCGAGATGAATACTGTGAGGAATTATGTTCTTGGGAAATTTTTGAAACGGGACCATGTCAGATTAACGCAAAGACTCGTCAATGTTACGCGTGGAACAAATCACTTCTAGGTGGGAGGCAACTTAATGAAGGGAATAACACTCTTGGAGTGTAA 462 0.3701 MVSISEIMLPLSMFLTILLASKFKAGESGFFTDNVKVIITNKLTNMQLGVHCKDKTHDLGFQALQIGQSYSFQVTINFRKNKLYFCSFNWITDSHYFDIYDQFRDEYCEELCSWEIFETGPCQINAKTRQCYAWNKSLLGGRQLNEGNNTLGV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi757g00004 153 PANTHER - 30 127 IPR010264 -
Gabi757g00004 153 Pfam Plant self-incompatibility protein S1 37 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi757g00004 Gabi-Chr757 169842 170303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi757g00004 28 139 Carbohydrate Esterase AT3G16970 35.000 7.85e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi757g00004 - - pvu:PHAVU_004G003100g 129.028