Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi757g00003 ATGGTTTCGGTCTCCAGAATTATGTTACCACTCTCTATGTTCTTAACCATACTTTTGGCTTCAAAGTTCAAGGCTGGTGAGAGTGGAATTTTTACTGACAATGTGAAAGTTCTAATCACCAACAAATTAACTAATATGTTGCTCGGTCTTCATTGCAAAGACAAGAATCATGATCTTGGGTTTCAAGTATTGCAGGTTGGACAAACATACAGTTTCGAGTTTCAGATTACTTTGATATTGAATAAGCTGTATTATTGCAGCTTTAATTGGAGAACAGGTTCTCACTATTTTGACATTTATGATCAAGTGCGAGATAACTGCACTTTTTGTGTTTGGCATATTTATGCAACGGGACCATGTCTTGTTAGAAAAGATGATCTTGATTGCTTTCACTGGAACACAATAGCTCACGGAGGGAGGCATCTTAGTAAAGGGAATAACACTCTTGAAGTGTAA 456 0.3684 MVSVSRIMLPLSMFLTILLASKFKAGESGIFTDNVKVLITNKLTNMLLGLHCKDKNHDLGFQVLQVGQTYSFEFQITLILNKLYYCSFNWRTGSHYFDIYDQVRDNCTFCVWHIYATGPCLVRKDDLDCFHWNTIAHGGRHLSKGNNTLEV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi757g00003 151 PANTHER - 31 124 IPR010264 -
Gabi757g00003 151 Coils Coil 151 151 - -
Gabi757g00003 151 Pfam Plant self-incompatibility protein S1 37 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi757g00003 Gabi-Chr757 153942 154397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi757g00003 28 134 Carbohydrate Esterase AT3G16970 39.316 2.62e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi757g00003 - - pvu:PHAVU_004G003100g 119.398