Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi756g00003 ATGTTTTCAAAATATGATTTTCTAAAGGATGTCAATCCTGCCAAGGAGGACTGGAGGATTAAGGTGAAGGTGGTTCTGGCTTGGAAAGTTCCTAACTTTCAACGTAGAGATTTTGACGACAATGTTGAAATGGTTTTATTGGATGAACAGGAATTGGTGAAGTTTGTGAACGTGTGGTGTCTGGTAGGAAGACGAAAAATGGTTGTGTTGGAGCTTGACAACCTGAGTCTTTCGGCTGATGGTGTGGAAAGTAGTATGAGGATGACTCAGCTGTCTACTCAGTCCTCCTATTCTTACGAAAATGATTTTCTGAAGGAGACTGAAAAGAAGTCTATCAGTGATGTGAAGCTTTGTGGCGAGGTTACGACTTGCATCACGTATGAGACTATAAAATCTATTGAGAGCAAATACAACTGGTGGTACAAGTCTTGCAAAAAATGTCCATTTTTTGTTTGTGAGCATTTTGAGAAGTGGTACTGTAAGAACTGCCAAAAACATTGGGAAGATTATTATCCGAGATTTAGTGTTCAGGTAAGAGTTGTGGATAACACGGATTCCGAATCATTTCTTCTGTTTGATCGCGACTGTGTGTCTTTGTTGGGGATGAGTGCTGGTGAATTGCGCGAGCTGCATTTCAAGAGGGGTGCGGATTTGGATCAATTTCCAGAAGAGTTAAATGTTCTGAATGAGAAGTCGATGCTGTTCAAGCTAAATATCAAGCAAAAGGATTTGAACTCATACAGCGAGCCCAAGTATAGTGTTTCTAAAAATTTTATCAGCAAAGACATAATCTCAGCGTTCATTAAGTCTCTTATCTTTGAAGTCGATCCAAATGATGAAGAAAATTTTGAGGATGCATGCGAAAATGAAATTGTATCGTCAGAACTAGAAAAGGTTGCGGTAACCCATTATTTGAATTTATATTGA 927 0.3894 MFSKYDFLKDVNPAKEDWRIKVKVVLAWKVPNFQRRDFDDNVEMVLLDEQELVKFVNVWCLVGRRKMVVLELDNLSLSADGVESSMRMTQLSTQSSYSYENDFLKETEKKSISDVKLCGEVTTCITYETIKSIESKYNWWYKSCKKCPFFVCEHFEKWYCKNCQKHWEDYYPRFSVQVRVVDNTDSESFLLFDRDCVSLLGMSAGELRELHFKRGADLDQFPEELNVLNEKSMLFKLNIKQKDLNSYSEPKYSVSKNFISKDIISAFIKSLIFEVDPNDEENFEDACENEIVSSELEKVAVTHYLNLY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi756g00003 308 PANTHER OS03G0429900 PROTEIN 129 246 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gabi756g00003 308 SUPERFAMILY Nucleic acid-binding proteins 109 257 IPR012340 -
Gabi756g00003 308 Pfam Replication factor-A C terminal domain 129 255 IPR013955 -
Gabi756g00003 308 CDD RPA1_DBD_C 124 272 IPR047192 -
Gabi756g00003 308 Gene3D - 88 265 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi756g00003 Gabi-Chr756 39998 42256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi756g00003 133 254 Core DNA Replication Machinery Family AT5G08020 26.829 1.44e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi756g00003 - - aof:109821376 140.198