Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi754g00011 ATGTGTGGAATATTTGCATATCTGAATTACAATGTGAACAGAGAGAGGAGATACATCTTGCAGGTTCTCTTCAATGGCCTTAGAAGATTGGAATATCGTGGTTACGATTCAGCTGGGATCGCCATCGATTCTTCTTCTTCTTCATCATCACAATCTCAATGCTCCTCCAATTCCGATCCTCCTCCTATTGTGTTCCGTCAAGAGGGAAACATCGAGTCTCTCGTTAAATCCGTTTACCAAGAAGTAGATGAAGTAGAATTGAACTTGGAAGAATCGTTTTCTACTCATGCTGGAATAGCGCACACTCGTTGGGCCACTCATGGAGAGCCTGCACCTAGGAATAGTCATCCTCAGACATCTGGTCCTGGAAATGAGTTCTTGGTTGTTCATAATGGTGTTATCACTAATTATGAGGTTTTGAAGGAAACTCTGGTCAGACATGGCTTTACCTTTGAATCTGAAACCGACACAGAAGTCATTCCCAAGCTTGCAAAGTTTGTTTACGACAAAACCACAGAGGAAGCAGGTGGTCAGGATGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTTGATGGAGCCTATGCCCTTATTTTCAAAAGTCTTCATTATCCTAATGAATTGATTGCTTGCAAGCGCGGTAGTCCGCTGATCCTAGGTGTTAAAGAATTGAGAGAAAATAAAGACAATGGTTCAGCATTTGAGGATAACAAATTCTTATCAAAAGATGGCCAGCCCAAAGAATTGTTTTTGTCCAGTGATCCCCATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGTGGGGTTTCTATTTTAAAGTTTGAGAATGACAAGGGAGAACGTGGCACTCCCTTTTCCAGAGCTGCTTCAGTGCAACGTGCATTATCTGTTCTTGAGATGGAAGTTGAGCAAATAAATAAAGGACATTATGAGCATTATATGCAGAAGGAAATTCATGAGCAACCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTGATACGTCGGGGATCTAGCAAATCCAAGTCTGTTATGTTAGGTGGACTGAAGGATCACCTCAAAACCATTAGGCGAAGTAGAAGGATAGTTTTCATTGGTTGTGGTACAAGCTACAATGCTGCTTTGGCAGCTAGACCCATTTTGGAAGAACTTTCTGGTGTTCCTGTTACTATGGAAATTGCAAGTGATTTATTGGATAGGCAGGGACCAATATACCGAGAAGATACAGCCGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTACTTGCACTGCAATATGCTTTAGATAACGGTGCATTGTGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATAGGTGTGGCAAGTACCAAGGCATACACGAGCCAAATAGTAGTTATGGCCATGTTGGCTCTTGCAATAGGAGGTGATACAATTTCCAATCAAGCGAGAAGAGAAGCTATTATTGATGGTCTATTCGACCTGCCAAACAAGGTCAGAGAGGTGCTGAAGCTTGATCAGGAGATGAAGGATCTAGCAAATCTATTGATTGCTGAGCAGTCTCTTCTTGTTTTTGGGAGAGGATACAACTATGCAACTGCTCTGGAAGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGGATACTTGCTGGTGAAATGAAGCATGGGCCTTTGGCTTTAGTGGATGAAAATCTTCCAATTGTTGTTATAGCTACACGTGATGCTTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTCATGCACGTAAAGGTCGCCTGATAGTTATGTGTTCAAAAGGGGATGCCGCTTCTGTATGTCCTGGAGAATCTTGTAGGCTAATTGAAGTTCCGCAAGTTGAGGATTGTCTTCAACCTGTAATTAATGTAGTCCCATTACAGTTACTAGCATATCATCTCACAGTATCGAGGGGATTTAACGTTGACCAGCCTCGTAATCTTGCCAAGAGTGTCACTACTCAATAA 2073 0.4211 MCGIFAYLNYNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDSSSSSSSQSQCSSNSDPPPIVFRQEGNIESLVKSVYQEVDEVELNLEESFSTHAGIAHTRWATHGEPAPRNSHPQTSGPGNEFLVVHNGVITNYEVLKETLVRHGFTFESETDTEVIPKLAKFVYDKTTEEAGGQDVTFSQVVLEVMRHLDGAYALIFKSLHYPNELIACKRGSPLILGVKELRENKDNGSAFEDNKFLSKDGQPKELFLSSDPHAVVEHTKKVLVIEDGEVVHLKDGGVSILKFENDKGERGTPFSRAASVQRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRRGSSKSKSVMLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGVPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIIDGLFDLPNKVREVLKLDQEMKDLANLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVCPGESCRLIEVPQVEDCLQPVINVVPLQLLAYHLTVSRGFNVDQPRNLAKSVTTQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi754g00011 690 CDD SIS_GlmS_GlmD_1 375 500 IPR035466 -
Gabi754g00011 690 Pfam SIS domain 541 672 IPR001347 GO:0097367|GO:1901135
Gabi754g00011 690 Pfam SIS domain 370 497 IPR001347 GO:0097367|GO:1901135
Gabi754g00011 690 Gene3D - 322 689 - -
Gabi754g00011 690 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 287 IPR029055 -
Gabi754g00011 690 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 530 675 - -
Gabi754g00011 690 CDD SIS_GlmS_GlmD_2 532 688 IPR035490 -
Gabi754g00011 690 ProSiteProfiles SIS domain profile. 537 680 IPR001347 GO:0097367|GO:1901135
Gabi754g00011 690 Pfam Glutamine amidotransferase domain 93 203 - -
Gabi754g00011 690 ProSiteProfiles SIS domain profile. 366 505 IPR001347 GO:0097367|GO:1901135
Gabi754g00011 690 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 302 - -
Gabi754g00011 690 CDD GFAT 2 278 IPR047084 -
Gabi754g00011 690 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 281 IPR017932 -
Gabi754g00011 690 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 690 - -
Gabi754g00011 690 Gene3D - 526 675 - -
Gabi754g00011 690 SUPERFAMILY SIS domain 321 689 IPR046348 GO:0097367|GO:1901135
Gabi754g00011 690 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 322 529 - -
Gabi754g00011 690 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 301 IPR029055 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi754g00011 98 222 PRT Gene Family AT4G38880 29.457 3.22e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi754g00011 K00820 - gmx:100779312 1221.07