Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi754g00005 ATGGGGTCCTGCTTTTCTGCTGAAAGCAGGAGCCCTCACCCCACTTCACCCTCCTCAGCTTTCAGGAAGAACAAGAATTCCAAAAAGAGATTTGGATCAAGAGCCACTTCCTTTGAGTATTGGAGGAATGAGCCCCTTCATAGGATCCCTGGTAGGATCTTCCTCAATGGCTCCACCCAAGTTGCCTCCTTGTTCACTCAACAAGGCAAGAAGGGCACCAATCAAGATGCCATGATTGTTTGGGAGAACTTTTGTTCTAGACAAGATACAATCTTCTGTGGAGTTTTTGATGGTCACGGTCCATTTGGTCACATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCCCATTGGGAACCTAGTATGCCTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAATAATGCAGGAAGCATGAACTCAGAAGAGGCCACATTTGTATCCGCTGACGAGGAATCCAGGGCATCCATTGATGTTGAAGAAATAGAAAAACACCCAGAAATCTTTCAGACACTCAAAGAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGAATCACCAAACCATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGGTTAAGCAGGGTTGTGATCTTGTTATTGGAAATGTTGGCGACTCTAGAGCTGTGCTGGGTACAAGAGAGAAAGATGATTCTCTTGTTGCAGTCCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGCAGAGAGAATTCGCAAATGTAAAGGACGTGTTTTTGCACTTCAGGATGAACCTGAAGTTGCTCGAGTCTGGTTGCCAAATAATGATTCCCCCGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTTAAGGATTTTGGTCTGATATCTGTTCCAGAGGTATCATACAGAAGACTCACTGAGAAGGATGAATTTGTTGTCTTGGCAACAGACGGGATTTGGGATGTGCTATCAAACAAAGAAGTGGTAGACATCATAGCAGCCGCGCCAAGGCGGTCCACAGCGGCTCGATCACTGGTTGAGTCAGCAGTTCGAGCTTGGAGATATAAATATCCAACTTCCAAAGTGGATGATTGTGCTGTGGTTTGCCTCTTTCTGGACTCAAACATGGAACAACAAATATCAAGTGCTTCTCATGCTAAGTCCAAAGAGCAGGCTAGAACTTGCAGGGGAAGCAATGGTACTAATGAAGAAAGCAACGAAGAAGAAGTGTGCAAGGAAGAAGAAGAGGAGGAGGAGGAGATAGATGCTGAGTCAGAAAAAGAATGGTCTGCTCTTGAAGGAGTATCTCGTGTAAACACATTATTAAATCTTCCAAGATTTGTACCTGACAAAGAAGACAAGGATGCTGCTGGAATCAGAAAACGCAAATGA 1416 0.4449 MGSCFSAESRSPHPTSPSSAFRKNKNSKKRFGSRATSFEYWRNEPLHRIPGRIFLNGSTQVASLFTQQGKKGTNQDAMIVWENFCSRQDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAHWEPSMPGEEVLKEISVNNAGSMNSEEATFVSADEESRASIDVEEIEKHPEIFQTLKESFLKAFKVMDRELKNHQTIDCFCSGTTAVTLVKQGCDLVIGNVGDSRAVLGTREKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVLATDGIWDVLSNKEVVDIIAAAPRRSTAARSLVESAVRAWRYKYPTSKVDDCAVVCLFLDSNMEQQISSASHAKSKEQARTCRGSNGTNEESNEEEVCKEEEEEEEEIDAESEKEWSALEGVSRVNTLLNLPRFVPDKEDKDAAGIRKRK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi754g00005 471 SUPERFAMILY PP2C-like 54 381 IPR036457 -
Gabi754g00005 471 MobiDBLite consensus disorder prediction 1 22 - -
Gabi754g00005 471 MobiDBLite consensus disorder prediction 415 434 - -
Gabi754g00005 471 Coils Coil 412 435 - -
Gabi754g00005 471 MobiDBLite consensus disorder prediction 390 437 - -
Gabi754g00005 471 CDD PP2Cc 60 380 IPR001932 -
Gabi754g00005 471 ProSiteProfiles PPM-type phosphatase domain profile. 61 380 IPR001932 -
Gabi754g00005 471 SMART PP2C_4 45 378 IPR001932 -
Gabi754g00005 471 PANTHER PROTEIN PHOSPHATASE 34 378 IPR015655 GO:0004722|GO:0006470
Gabi754g00005 471 Gene3D - 56 383 IPR036457 -
Gabi754g00005 471 FunFam probable protein phosphatase 2C 33 56 383 - -
Gabi754g00005 471 MobiDBLite consensus disorder prediction 390 409 - -
Gabi754g00005 471 MobiDBLite consensus disorder prediction 1 30 - -
Gabi754g00005 471 Pfam Protein phosphatase 2C 158 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi754g00005 Gabi-Chr754 34880 39888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi754g00005 1 459 PP2C-type Phosphatase Gene Family AT3G02750 62.049 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi754g00005 - - gmx:100790373 756.133