Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi754g00003 ATGGGGTCCTGCTTTTCTGCTGAAAGCAGGAGCCCTCACCCCACTTCACCCTCCTCAGCTTTCAGGAAGAACAAGAATTCCAAAAAGAGATTTGGATCAAGAGCCACTTCCTTTGAGTATTGGAGGAATGAGCCCCTTCATAGGATCCCTGGTAGGATCTTCCTCAATGGCTCCACCCAAGTTGCCTCCTTGTTCACTCAACAAGGCAAGAAGGGCACCAATCAAGATGCCATGATTGTTTGGGAGAACTTTTGTTCTAGACAAGATACAATCTTCTGTGGAGTTTTTGATGGTCACGGTCCATTTGGTCACATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCCCATTGGGAACCTAGTATGCCTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAATAATGCAGGAAGCATGAACTCAGAAGAGGCCACATTTGTATCCGCTGACGAGGAATCCAGGGCATCCATTGATGTTGAAGAAATAGAAAAACACCCAGAAATCTTTCAGACACTCAAAGAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGAATCACCAAACCATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGGTTAAGCAGGGTTGTGATCTTGTTATTGGAAATGTTGGCGACTCTAGAGCTGTGCTGGGTACAAGAGAGAAAGATGATTCTCTTGTTGCAGTCCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGCAGAGAGAATTCGCAAATGTAAAGGACGTGTTTTTGCACTTCAGGATGAACCTGAAGTTGCTCGAGTCTGGTTGCCAAATAATGATTCCCCCGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTTAAGGATTTTGGTCTGATATCTGTTCCAGAGGTATCATACAGAAGACTCACTGAGAAGGATGAATTTGTTGTCTTGGCAACAGACGGGATTTGGGATGTGCTATCAAACAAAGAAGTGGTAGACATCATAGCAGCCGCGCCAAGGCGGTCCACAGCGGCTCGATCACTGGTTGAGTCAGCAGTTCGAGCTTGGAGATATAAATATCCAACTTCCAAAGTGGATGATTGTGCTGTGGTTTGCCTCTTTCTGGACTCAAACATGGAACAACAAATATCAAGTGCTTCTCATGCTAAGTCCAAAGAGCAGGCTAGTTCAGGGATCCAAGTGAATGGGGATGACGGGGAAGATGTTTCTGGACCTAATGTTCTGGTAAGGTCAGGAACTTGCAGGGGAAGCAATGGTACTAATGAAGAAAGCAACGAAGAAGAAGTGTGCAAGGAAGAAGAAGAGGAGGAGGAGGAGATAGATGCTGAGTCAGAAAAAGAATGGTCTGCTCTTGAAGGAGTATCTCGTGTAAACACATTATTAAATCTTCCAAGATTTGTACCTGACAAAGAAGACAAGGATGCTGCTGGAATCAGAAAACGCAAATGA 1485 0.4471 MGSCFSAESRSPHPTSPSSAFRKNKNSKKRFGSRATSFEYWRNEPLHRIPGRIFLNGSTQVASLFTQQGKKGTNQDAMIVWENFCSRQDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAHWEPSMPGEEVLKEISVNNAGSMNSEEATFVSADEESRASIDVEEIEKHPEIFQTLKESFLKAFKVMDRELKNHQTIDCFCSGTTAVTLVKQGCDLVIGNVGDSRAVLGTREKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVLATDGIWDVLSNKEVVDIIAAAPRRSTAARSLVESAVRAWRYKYPTSKVDDCAVVCLFLDSNMEQQISSASHAKSKEQASSGIQVNGDDGEDVSGPNVLVRSGTCRGSNGTNEESNEEEVCKEEEEEEEEIDAESEKEWSALEGVSRVNTLLNLPRFVPDKEDKDAAGIRKRK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi754g00003 494 MobiDBLite consensus disorder prediction 390 408 - -
Gabi754g00003 494 PANTHER PROTEIN PHOSPHATASE 34 378 IPR015655 GO:0004722|GO:0006470
Gabi754g00003 494 MobiDBLite consensus disorder prediction 1 22 - -
Gabi754g00003 494 SUPERFAMILY PP2C-like 54 381 IPR036457 -
Gabi754g00003 494 Coils Coil 435 458 - -
Gabi754g00003 494 CDD PP2Cc 60 380 IPR001932 -
Gabi754g00003 494 MobiDBLite consensus disorder prediction 390 459 - -
Gabi754g00003 494 ProSiteProfiles PPM-type phosphatase domain profile. 61 380 IPR001932 -
Gabi754g00003 494 SMART PP2C_4 45 378 IPR001932 -
Gabi754g00003 494 Pfam Protein phosphatase 2C 159 358 IPR001932 -
Gabi754g00003 494 Gene3D - 56 382 IPR036457 -
Gabi754g00003 494 FunFam probable protein phosphatase 2C 33 56 383 - -
Gabi754g00003 494 MobiDBLite consensus disorder prediction 1 30 - -
Gabi754g00003 494 MobiDBLite consensus disorder prediction 438 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi754g00003 Gabi-Chr754 34880 39888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi754g00003 1 482 PP2C-type Phosphatase Gene Family AT3G02750 63.089 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi754g00003 - - gmx:100790373 793.497